Condylostylus longicornis: 129609424
Help
Entry
129609424 CDS
T09756
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
clon
Condylostylus longicornis
Pathway
clon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129609424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129609424
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129609424
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129609424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
TMEM71
Motif
Other DBs
NCBI-GeneID:
129609424
NCBI-ProteinID:
XP_055377303
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKVVEKYEADLKKEIKKLQRL
RDQIKSWIASAEIKDKSALLDNRRLIETQMERFKIVERETKTKAYSKEGLGAAQKLDPAQ
RVKDEIRNWLKESISSLQIQIDQYESEIESLLAGKKKRLDRDKQDRMDELRAKLDRHKFH
ITKLETLLRLLDNDGVEVKQVARIKEDVEYYIESSQDPDFEENEYMYDEIIGLDEVELSG
TGIPSSATTDSNNSNETGGSPSSCVSGGSPVQSPAALNCSNANNLNYSSDSTSVEFTSAD
KRNKNENNASSKVKQPVKPTAVRANNKADANSNSSSSNNSSSVQLTQQQHTTQPQSLSVA
ATVAVAAATTQQAQLQQQQQQQNKNIISSTPSKNQSHGTNNSSIGTGNSTSATSAVAAVN
SINQQQQQQNSTGVGNHTSSASSNIQAQSVIQPTQPIIAFAAVAKNNTYSSSTHNSTSNS
NSIGNNNATSITTAVANSNSSNVVGNSTLVNCISPNPLTNSNSAARASPGLVSPKQQLAN
GTLLNHNSKQPGIIPVSGSTTLNSNNLDAMSTLKTMAQEAINRASTDSTLQAAPTPADTR
QHQQQQQQQQQQQQQQQNQQTAPSSQQQQSSTQHFSPAVTDTTANQNANGPTQAPQQQQT
GTAASVVSGTANISAVGATTNAGSLGVGGGTSQGNVTNVSGNKQMQVGTNEAYIPPLLGV
APLGTSPLHKEHQMQFQMMEAAYYHLPTPSDSEKLTTYLPRQPVQTPAHYPQTQLPHSDT
VEFFQRLSTETLFFIFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINDEF
EQGTYIYFDYEKWGQRKKEGFTFEYRFLEDKDLN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggagaaatagatagatgtcttaaaaaagtgacagaa
ggagtggaaacatttgaagacatttggcaaaaagtacacaatgcgacgaatagtaatcaa
aaggttgtcgaaaaatatgaggccgaccttaagaaggaaatcaaaaagttgcaacggctg
cgcgatcagattaaatcatggatcgcgtccgcagaaatcaaggacaaaagtgcactctta
gataataggcgacttattgaaactcaaatggagagatttaaaattgttgaacgtgaaaca
aaaacaaaagcgtattcaaaagaaggtttaggagctgcacaaaaattagatccagcgcaa
cgggttaaagatgaaattcgaaattggcttaaagaatcaattagttcgttacaaatacaa
attgatcaatatgaaagtgaaatagaatccctactagcaggcaaaaagaaaagattagat
cgtgataaacaggatcgaatggatgaattacgtgcaaaattggatcggcataaatttcat
attacaaaactcgaaacattattaagattattggataatgatggtgttgaagttaaacag
gtggcccgtataaaagaagatgttgaatattacatagaatcctcgcaggatccagatttt
gaagaaaatgaatatatgtacgatgaaattattggtctagatgaggtcgaattatcagga
acagggattccatcttctgcgacaacagacagtaataatagtaatgaaactggtggttcg
cctagcagttgtgtttcaggtggtagtcctgttcaatctccggccgcattaaactgtagt
aatgcgaacaatcttaactacagcagtgattcaacgtcggttgagtttacatcagccgat
aaacgtaataaaaatgaaaataatgccagtagtaaagtgaaacaacctgttaaaccaaca
gcggtaagggctaataataaagcggatgcaaattcaaattcttcgtcatcgaacaattct
agctctgtgcagttgacacagcagcagcatacaacacaaccgcagtcgctgtcagtggcg
gcaacagttgcggtggccgcagcgacaactcaacaagcccaactgcagcagcagcaacag
caacaaaataaaaatataattagttctacacctagtaaaaaccaatctcatggtacgaat
aattcatcaattggaactggtaatagtacatcagcaacatctgcggttgctgcagtaaat
agcattaaccaacagcagcagcaacaaaattcgactggtgtgggtaatcatacatcatct
gcatcatcgaatattcaggctcaatctgtgattcaacctacacaaccaataattgcattt
gcagctgtagcgaaaaacaatacatattcctcttcgacgcataacagcacttccaatagt
aacagtataggaaataataatgcgacatcgataacgacagctgtggcaaatagtaattca
tcaaatgtcgtagggaatagtacacttgttaattgtatttcaccaaatccattgacaaat
agtaatagtgcggcacgagcttcaccaggacttgtttcgcctaaacaacaactggcaaat
ggcacactccttaatcataatagtaaacagcctggtattatacctgtatcaggttcaact
acacttaactctaacaaccttgatgcgatgtcaacgcttaaaacgatggcacaagaggcc
attaaccgtgcttcaacagattcaacattacaagcagcgccaacgcctgctgatacaaga
caacatcaacagcaacaacaacaacagcagcagcaacaacaacagcaacagaatcaacag
acagcaccttcatctcagcaacaacaatcgtctacccagcatttttcaccagccgttacg
gatacaactgccaatcaaaatgcaaacggcccaacgcaagcaccacaacagcaacagact
ggtactgcggcatcagttgttagcggtacagcaaatatatcagcagttggtgcaacaaca
aatgctggctctttaggagttggtggcggtacatcacaaggtaatgtcaccaatgttagt
ggtaataaacagatgcaagttggtacaaatgaagcatatattccaccattacttggtgtc
gctccattaggaacatcgccattacataaagagcatcaaatgcaattccaaatgatggaa
gctgcatattatcatttgcccactccgagtgattccgaaaaattaacaacgtatttacca
agacaacctgtacagacaccagcccattatccacagactcaacttccacattcggatacc
gttgaatttttccaacgcttatcaaccgaaactctattctttatattttattatatggaa
ggatccaaagcgcaatacttagctgctaaagcgcttaaaaaacaaagctggagatttcat
acgaaatatatgatgtggtttcaacgccatgaggaaccaaaagtaattaatgatgaattt
gaacaaggtacatatatttattttgattatgagaagtggggccagcgtaaaaaagagggg
ttcacgtttgaatatcgattcttagaagacaaggatcttaattga
DBGET
integrated database retrieval system
