Condylostylus longicornis: 129609971
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Entry
129609971 CDS
T09756
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
clon
Condylostylus longicornis
Pathway
clon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129609971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clon03021
]
129609971
03019 Messenger RNA biogenesis [BR:
clon03019
]
129609971
Transcription machinery [BR:
clon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129609971
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129609971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf-CCHC
zf_CCCH_4
zf-CCCH_3
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
129609971
NCBI-ProteinID:
XP_055378233
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MEFLIASVDHLEFKIERDLNQQFGALPLPFPGMDKSTAAVCQFFNGVDGSECDKGASCPF
RHIRGGTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPE
SKIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLAGFCPDGHQCKYMHPRFELPPPPEIP
KDQIVKRPPTCHYCGELGHKASGCSKMPPEQKEATIRQEEARFKALSYFKQQHHREQQQI
YQQQLQGANENGNNENHNDRSQSESKPPNPKPAPKPLEEITCFKCGNKGHYANKCPKGHL
AFLSNRNQQS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaatttttaatagcaagtgtagatcatttagagttcaaaattgaaagagatttgaat
caacaattcggagccttacctttaccttttcccggcatggataaatctaccgctgctgtg
tgtcagtttttcaatggtgtcgatggatcagaatgtgacaaaggtgcatcgtgtccattt
cgtcatattcgtgggggcactattgtatgtaaacattggttaagaggtttatgtaaaaaa
ggagatcaatgtgaatttttgcacgaatatgatatgacaaaaatgcctgaatgctacttt
tactcaaggtttaatgcatgccacaataaagaatgtccatttctgcatatagatccagaa
agcaaaattaaagattgcccgtggtacgaccgtggattttgtaggcatgggcctcattgc
cgtcacaggcatgtacgtcgtgtgttatgcatgaattacttagctggattttgtccagat
ggacatcaatgtaaatatatgcatcccagatttgaattacctcccccgcctgaaattcct
aaagatcaaatagttaaaagacctccaacatgtcattattgtggtgagctcggtcataaa
gcttctggttgcagtaaaatgcctccagaacaaaaagaagccacaattagacaagaagaa
gctagatttaaagcccttagttattttaaacaacagcatcatcgtgaacaacagcaaata
tatcaacaacaactgcaaggtgctaatgaaaatggaaataatgagaaccacaatgaccgg
tcgcaaagtgaatctaaacctccgaatccaaaacctgctccaaaaccgttagaagaaata
acctgctttaaatgtggtaataaaggtcattatgcaaataagtgtccaaagggacattta
gcttttttgtcaaatcgaaatcaacaaagctga
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