KEGG   Condylostylus longicornis: 129611149
Entry
129611149         CDS       T09756                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
clon  Condylostylus longicornis
Pathway
clon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129611149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clon03019]
    129611149
Messenger RNA biogenesis [BR:clon03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     129611149
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     129611149
SSDB
Motif
Pfam: RNase_PH RNase_PH_C RB_A
Other DBs
NCBI-GeneID: 129611149
NCBI-ProteinID: XP_055380092
LinkDB
Position
Unknown
AA seq 297 aa
MANVVLSEAEKAFILHGVEDELRLDGRSCKDYRPMELETDIVSHASGSARLRLANTDVLA
AVKTEIDTPNSETPNCGKIEFFVDCSANATPAFEGRGGEELAVELADTLAKAYESTSAFD
LTTLCILTGQQCWKLYVDVLILECGGNLFDAVSLAVKSALYNTKIPKVTAALMDGGSCDL
KLSDDPYDCTRINTEHIPIFVTICKIGDACVIDPSAEETECSSVSVVISVSQRDGKSFIT
CTHMVGIGSLHPETLLKCIEMGISVSKCLDKTLMKTLKMEENRAELNGKREIAGFLK
NT seq 894 nt   +upstreamnt  +downstreamnt
atggctaatgtagtactaagcgaagcagaaaaagcatttattcttcatggagtagaggac
gaattaagacttgatggtagatcgtgcaaggattatcgacctatggaactagaaactgat
attgtaagtcatgcaagtggatcagcacgtctgcgtttagcaaacaccgatgtgttagca
gcagtgaaaaccgaaatagatacacctaattcagaaaccccaaactgtgggaaaatagag
ttttttgttgactgctcagctaatgccacacctgcttttgaaggtcgcggcggtgaagaa
cttgcagttgagcttgctgatacattagctaaagcttatgaatctacttcggcttttgat
ttaactaccttatgtatattgaccggtcagcaatgttggaaactttatgttgatgttttg
attttagaatgtggtggaaatttgtttgatgcagtatccctagcagttaagtctgcttta
tacaatacaaaaattccaaaagttacagccgctttaatggatggaggttcatgtgatcta
aaattgtctgatgatccgtatgattgcacaaggataaatacagaacacataccaattttc
gtaactatttgcaaaataggagatgcttgtgttattgatccatcagctgaggaaacagaa
tgtagttcagttagcgttgtaatttcagtatcacaaagggatggaaaaagttttataaca
tgtacacatatggtcggtattggttctttgcatccagaaacattgttaaaatgtattgag
atgggaataagtgtttcaaaatgtttagataaaactttgatgaaaacattgaaaatggaa
gaaaatagggcagagctaaatggaaaaagagaaatagcaggttttcttaagtaa

DBGET integrated database retrieval system