Condylostylus longicornis: 129611430
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Entry
129611430 CDS
T09756
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
clon
Condylostylus longicornis
Pathway
clon03020
RNA polymerase
clon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129611430
09124 Replication and repair
03420 Nucleotide excision repair
129611430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clon03021
]
129611430
03400 DNA repair and recombination proteins [BR:
clon03400
]
129611430
Enzymes [BR:
clon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129611430
Transcription machinery [BR:
clon03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129611430
DNA repair and recombination proteins [BR:
clon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129611430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
129611430
NCBI-ProteinID:
XP_055380551
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYENEEENFEEENAEEITHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIDLQAEAQHTSGEIETPPRFLLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKIIEGQDPIETQNQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKCEIRSCLEHSSRPTSTLWVNMM
ARGGQTIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYEFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQ
KFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIVDATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGNLLLKKTHIEMLKERDYNNYSWQVLVASG
VVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSCFYRSYRDSENKRIGDQEEQFEKPSRNTCQG
MRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTINLPENDDDLEGTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECKG
CKNKTQISQVKLPYAAKLLFQELMSMNIAPRLMVI
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaatgaagaagaaaatttcgaggaagaaaatgcagaagaaattactcacgag
ttatggcaagaagcttgctggattgttataaacgcatactttgatgaaaaaggtcttgta
cgacaacaattagattcatttgacgaatttattcaaatgtccgttcagagaattgttgaa
gactctcccgcaatagatttacaagcagaggcacaacatacgtccggtgaaatagaaact
ccacctagatttttgttaaaatttgatcaaatttatttgtcaaaaccaacacattgggaa
aaagatggttctccaagtccaatgatgccgaatgaagctcgtttgagaaatttgacatac
tcagctccactttatgtcgacattaccaaaacgaaaataattgaagggcaagacccaatt
gaaacacagaatcaaaaaacatttattggcaaaattccaattatgttacgttcaacttat
tgtttgcttagtcaactgactgatcgtgatttaacagaattaaacgaatgtccattggat
ccaggtggttatttcattataaacggatcagaaaaagtattgattgctcaagaaaaaatg
gcaacaaatacagtgtacgtatttagcatgaaagatggcaaatatgcatataaatgcgag
atccggtcttgccttgaacatagttcaagaccaacatctacgctttgggtcaatatgatg
gcaagaggtggtcaaacaatcaaaaaatctgcaattggtcaaagaattattgcaatttta
ccatatatcaaacaagaaatcccaattatgatagtattccgagccctcggttttgtagct
gatagagatattcttgaacatatcatatatgaatttgatgatcctgaaatgatggaaatg
gttaaaccatctcttgatgaagctttcgtagttcaagaacaaaatgtagctttaaatttc
ataggagctagaggtgcgcgacctggtgtgacgaaagacaagcgtataaagtatgctaaa
gaaatattacaaaaggaaatgttaccccacgtaggtgtgtccgatttttgcgaaacaaaa
aaagcttacttccttggatacatggtacatagattattattagcagccttgggcagaaga
gaacttgatgatcgtgatcactatggtaataaacgacttgatttagctggtccgctactg
gcattcttatttagaggtctttttaaaaaccttatgaaagaagtaagaatgtatacccaa
aaatttattgatagaggaaaagattttaacttagaattggccatcaaaactaatataatt
accgatggattgagatattctttagctacaggtaattggggcgaccagaaaaaagctcat
caagccagagctggcgtatctcaagtgttaaacagattaacatttgcatcaacattatct
catttaagacgtgtaaattcacccataggtagagatggaaaactagcaaaacctagacag
ttacacaatactttgtggggcatgttatgtccagctgaaacgccggaaggggcggctgta
ggcttagtaaaaaacttggcattgatggcttatatttcggttggttctcaaccatcacct
attctagagttcttggaagaatggtctatggaaaatcttgaggaaatcgccccttcagct
atagttgatgcaacaaaaatttttgtaaatggctgttgggtaggaatacatcgtgatcct
gaacagttaatggctaccttacgtaaacttcgacgtcaaatggatatcattgtatctgaa
gtatctatgattagagacattcgggatcgtgaaattcgtatttatacagatgctggacga
atttgcagaccgttgttgattgttgaaaatggcaatttgcttctgaagaaaacccatatt
gaaatgttaaaggaacgtgattataataactatagctggcaagtacttgtggcttctggt
gtagtagaatatatcgatactcttgaagaggaaactgttatgattgctatgtctccatat
gatttaaaacaggacaaagattatgcatactgtacaacatacacacattgtgaaattcat
ccagctatgatattgggggtttgtgcatcaattattccatttccagatcataatcaaagc
cctcgtaacacatatcaaagtgctatgggtaagcaagctatgggagtttacattacaaat
tatcatgttcgtatggacacccttgcacatgtgttatattatccaatgaaaccattagtt
accacaagatctatggaatatttgcgctttagagaacttcctgccggcataaattcaatt
gttgcaattttatgctatactggttataatcaggaagacagtgttatcttaaatgcttca
gccgtagaaagaggattcttcagatcatgtttctaccgtagttatcgggattcagaaaat
aaacgtataggagaccaagaagaacaatttgagaaaccatcgcgtaacacatgtcagggt
atgagaaatgcacattatgataaattagatgacgatggtatcatagcaccaggcataaga
gtttctggagacgatgtagttattggaaagacaataaacctaccagaaaatgatgatgat
ctggaaggaacaacaaaacgtttcacaaagcgagatgcatccacatttttgagaaattca
gaaactggtattgttgatcaggttatgttgacattaaacagtgaaggatataagttttgt
aaaatcagagtacgctcagtgcgcatcccgcaaattggagacaaatttgcttctcgtcac
ggacagaaaggtacttgcggaattcaatataggcaagaagatatgcctttcacatgtgaa
ggtttaacacctgatattattattaatcctcatgctatcccctctcgtatgacaattggc
catttaatcgaatgtttgcaaggaaagcttggttcaaataaaggagaaattggtgacgca
actccatttaatgacgctgttaatgtacagaaaatttcgacatttttgcaagaatatggt
taccatcttcgaggtaatgaagttatgtataacgggcataccggaagaaaaattaatgcc
caggtatttttgggaccaacttattatcagcgtcttaaacatatggtagatgacaaaatt
cattctagagcccgtggacctgtacaaattttagtgagacaaccaatggaaggtagggca
agagatggtggcttgcgttttggcgaaatggaacgtgattgtcaaatttcacacggcgct
gctcaatttttgagagaacgtttgttcgaagtttctgatccttacagaattcatatttgc
aatttctgtggactgatagcgattgcaaatttaagaaataatacatttgagtgcaaagga
tgcaagaacaaaacgcagatatctcaagttaaattaccatacgctgcaaagttattattc
caagagttgatgtcaatgaatatagcgcctcgtttaatggtaatctaa
DBGET
integrated database retrieval system
