KEGG   Condylostylus longicornis: 129612471
Entry
129612471         CDS       T09756                                 
Name
(RefSeq) uncharacterized protein LOC129612471
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
clon  Condylostylus longicornis
Pathway
clon03018  RNA degradation
clon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129612471
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129612471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clon03019]
    129612471
   03041 Spliceosome [BR:clon03041]
    129612471
Messenger RNA biogenesis [BR:clon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129612471
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     129612471
Spliceosome [BR:clon03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    129612471
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 129612471
NCBI-ProteinID: XP_055382053
LinkDB
Position
Unknown
AA seq 147 aa
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDAQVKSRNRTDMKTNRSGGGNTGNPNQRSRQGNRNFNNR
TPGIGGNRASSQGNRPLAQTNKVMNKN
NT seq 444 nt   +upstreamnt  +downstreamnt
atgcttccgttatccttgctcaaaacggcacaaagtcatccgatgttagttgaattaaaa
aatggagaaacttataatgggcatttagtaagttgcgatacatggatgaatatcaatttg
cgtgacgtaatttgtacatcaaaagacggtgatagattttggcgtatgccagaatgttat
attcgaggtagcactattaagtatcttcgtataccagatgaagttattgatatggtaaaa
gaggatgctcaagtaaaatcaagaaatcgaacggatatgaaaaccaatcgttctggaggt
ggaaatactggaaatcctaaccaaagaagtcggcaaggaaatcgtaatttcaacaataga
acgcccggtattggtggaaatagggcgtcgtcgcagggaaacagaccattagctcaaact
aataaggttatgaacaaaaattag

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