Condylostylus longicornis: 129612697
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Entry
129612697 CDS
T09756
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
clon
Condylostylus longicornis
Pathway
clon03440
Homologous recombination
clon03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129612697
03450 Non-homologous end-joining
129612697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clon03032
]
129612697
03400 DNA repair and recombination proteins [BR:
clon03400
]
129612697
DNA replication proteins [BR:
clon03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
129612697
DNA repair and recombination proteins [BR:
clon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
129612697
BRCA1-C complex
129612697
NHEJ (non-homologous end-joining)
MRX complex
129612697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
HIP1_clath_bdg
HALZ
ABC_tran
AAA_16
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
129612697
NCBI-ProteinID:
XP_055382426
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MSSIVQLTIQGIRSFGTKAEDKQSITFSSPVTLILGANGCGKTTVIECLKYALTGELPPG
SDHGKSFVHDPKIFDAMECIGQVKLQVKNIRGQTLTVTRAVKITQKRGRAGPNFMALDST
ITYGNNEGQSISKRAIDVDNELERFMGVSKAIINNVIFCHQENACWPLDEPKKLKEKFDA
IFGTSNYDKAIEKMIKIKKLQQDSLKLKRNDLRYAEVRKKEADTKNLDLANSRQKKEDLL
KQSDQFDNDLIPVEERIKAVQKIEIEIGSYNGERIKLKADIKSCEEHIKSLTSKIKKEFD
GSVDQIDIEIRNFHENMEEKKSELKSLEDLLNRIKNQERKLRSSLTDLEHKRSTLLSKRQ
LEQEYVGKRAKKISDLCEKLEIPVSIDIENAKEDEVLNIYEQIGKAFVLEDKKISELSEK
HDKTENEKQTEIDKCRENKVTIESDIQSKRGQKSKLQQDLKKVEDEINQNEASAKKLASI
TAEVEKADKLLKTFEEKVNFEDKEREINDKKSDIKTKEEQYRELDKKLTFLNSISKKVIE
VNLKEQQLEKKEQEIRKVKNKHGSNIKTIFPDKEIESNYKKQFQNINEEIQKQIKDLQEK
ENENRLKLNSLEVERKNKREELSKWENDHQQNSDKIFDKCHGTPYEEILQRSKENVEKYQ
LELGALKSSESMFKKYMKNINDDPCCPLCHKNLSNDEATDLTAEMAEEIRRVPANIKKTE
QSLKKEQHNYESLMGLRSIIDKNTKLEEDIPKRKEDLKKLEDQLSELSKDIESCQLLIAE
PSSNLDLVNSMLGDMALLDEALKDASRIKDDLQSLKEKLPKEAENLNIDDIQTEKDTVST
ELDTNRKELEKLENDYRTQKSDITRLKETKLALKDNQIKLQEGIQALPQLKSRYDEISKN
LDLLSKEIETLEEELNPLKSKLDNLIKEKENLKTENRTILNKSKSKLDGLKKINHEVESL
NKELKNLAEENLEEEIENLKELFRRNMNEQAENGKENTQATEKIENLKSIISNQELAERD
LKDNRELKVLQKKNIRLKDQLEAVLKQMGDLSMDTASKERAELIKKRDAIVTKRGQLRGQ
IGEIESQIKKLDAELKDPKFKDALKNYRRLFYEVEILEQVVHDLNEYHFALDRALSQYHK
EKMQKINRLIREFWRQIYRGNDIDYIEIKTESEDTKSSAAKRRTFNYSVVQSKNNTKLEM
RGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNIISLCETLSRIIEDRQ
SQCNFMLIIITHDEEFISALGKIRNYHKVSRNAEGKSVVRQVKLATEM
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctattgtgcagttaacgatacaaggaataaggagttttggaacgaaagctgaa
gataaacagagtataacattttcttctccggtaaccttaattcttggagctaatggttgt
ggcaaaacaactgtaatagaatgtttgaaatatgcattaacaggagaattaccacccggc
agtgatcatggcaaaagttttgttcatgatcccaaaatttttgatgcaatggaatgtatt
gggcaagtaaagttacaggtcaaaaatattcgtggacaaactctcacggtaaccagggca
gttaagataactcagaaacgtgggcgtgctggtccaaattttatggctttggattctaca
attacctacggtaataatgaaggtcaaagcataagtaaaagagcaattgatgttgataat
gagttagaacggtttatgggagtttcaaaagctataataaacaacgttatattttgccat
caagagaacgcctgctggcctttagatgagcctaaaaaattaaaagaaaaatttgacgca
atttttggtaccagtaattatgacaaagctatagaaaaaatgattaaaataaagaaacta
caacaagattcgctgaaattaaagcggaatgatttaagatatgctgaagtcagaaaaaag
gaggcagatactaaaaatttagatttggctaattcaagacaaaaaaaagaagatttgctg
aaacaaagtgaccaatttgataatgatctgataccagttgaagaacgaataaaagctgtt
cagaaaatagaaatagaaataggaagttataatggagagagaatcaaattaaaagcagat
ataaaaagttgcgaagagcatattaaatctcttacgtcaaaaatcaaaaaagaatttgat
ggcagtgttgatcaaatagacatagaaattcgtaattttcacgaaaacatggaagaaaaa
aaatcagaattgaaaagcttggaagatttgcttaatcgtattaaaaaccaagaacggaaa
cttcgatctagtttaactgacttggagcacaaacgttctactctgttaagtaaacgtcaa
ttagaacaggaatatgtgggtaaaagagcaaaaaaaatttctgatctttgtgaaaaacta
gaaatacccgtatccatcgatattgaaaatgctaaggaagacgaagttttaaatatttat
gagcaaattggtaaagcttttgtattggaagataaaaagatctcggaattatccgaaaag
cacgacaaaactgaaaatgaaaaacaaactgaaattgataaatgtcgggaaaataaagtt
acaattgaaagtgacatacaatctaagcggggacaaaaatcaaaactgcaacaagattta
aaaaaagtcgaagacgaaataaaccaaaacgaagcaagcgctaaaaagttggcatctata
actgccgaggtagaaaaggctgacaaattattaaaaacttttgaggaaaaggtaaatttt
gaagataaggaacgtgaaataaacgataaaaaatctgatattaaaacaaaagaagagcaa
tatcgcgagttggataaaaaattgacgttcttaaactcaatttccaagaaagtgattgag
gttaatttaaaagagcaacaacttgaaaaaaaagaacaggaaattcgaaaagtgaaaaac
aaacacggaagtaatattaaaactatatttcctgataaagaaattgaatcaaattacaaa
aaacaatttcaaaatattaatgaagaaatccaaaaacaaattaaagatttacaagaaaaa
gaaaatgaaaatcggttgaaattgaacagtttagaagtagagcgcaaaaataaaagagaa
gaattgtccaaatgggaaaacgatcatcaacaaaattctgataaaatatttgacaaatgt
catggtactccatatgaggagatattgcaacgttccaaagaaaatgtggaaaaatatcaa
ttggagctcggcgccttgaaatcttcagaatcaatgtttaaaaaatatatgaaaaatatt
aatgacgatccatgttgcccattatgtcataaaaatttatcaaatgatgaggcaaccgat
ttaactgctgagatggcagaagaaatacgcagagttcctgccaatattaaaaaaacagag
caatccttaaaaaaggagcaacacaattacgagtctttaatgggattaaggtctattatc
gacaaaaacacaaaacttgaagaggatataccaaaaagaaaagaggatttgaagaagtta
gaagatcaattatctgagctatcgaaagatattgaatcatgtcagttgttaattgctgaa
ccatcttctaatttagatttggttaattcaatgttaggcgatatggctttgctagatgaa
gcattgaaagatgcttctagaattaaggatgacttgcaaagtttaaaggaaaaattacca
aaagaagcagaaaatttaaatatcgatgatattcaaactgaaaaggatacagtatctacg
gagctagacacaaacagaaaagaattagaaaaattggaaaatgattatcgtacacaaaaa
agtgatataacaagattaaaagaaacaaaattggcattaaaagataatcaaatcaaatta
caagaaggaatacaagcattacctcaactcaaatctcgttacgatgaaatttctaaaaat
ttagatttactttctaaggaaatagaaactttggaagaagaattgaaccccttgaagtca
aaacttgataatttaattaaggaaaaagaaaacttaaaaactgaaaatcgtactatattg
aataaatctaagagcaaactagatggtttgaaaaaaattaatcacgaagttgaaagtctg
aataaggaactgaaaaatttggcggaagaaaatttagaggaagaaatagaaaatttgaag
gaattatttagacgtaatatgaacgaacaagccgaaaatggaaaagagaatactcaagca
acagaaaaaattgaaaatcttaagtccataatatcaaatcaagaattagcggaaagagac
ctaaaagacaatcgagaattgaaagttttgcagaagaaaaatattcgactgaaagatcaa
ttggaagctgttttaaaacaaatgggtgatttgagtatggacactgcatcaaaagaacgt
gctgaactaataaaaaaaagagacgcaatagtgacaaaacgtggacaattacgagggcaa
atcggcgaaattgagagtcaaatcaaaaaacttgatgctgaattaaaagatccgaagttt
aaagatgcattaaaaaattatcgaagattattttatgaagttgaaatattggaacaagta
gttcatgatttaaacgaatatcattttgctttagatagagcattaagccaatatcataaa
gaaaaaatgcaaaaaatcaaccgtcttatacgtgaattttggcgtcagatatatcgtgga
aatgatatagattatattgaaataaaaactgaaagcgaagatacaaaatcatcagcggct
aaaaggcgtacatttaattacagcgttgtgcaaagcaagaacaacactaaattagaaatg
cgtggccgctgtagcgctggacaaagagttttagcctcattaataattcgtatggcatta
gctgaaacatttagttcaaattgtggcgttttagcattggatgaaccaaccaccaatcta
gatcgtaataatataatttctttatgtgaaacattaagtcgtatcatagaagatcgtcaa
agtcaatgcaattttatgcttattataattacacatgatgaagagtttatatcagcttta
ggtaaaattcgaaattatcataaagtttcaaggaatgcagagggaaaaagcgttgtcaga
caagtaaaattggcaactgaaatgtaa
DBGET
integrated database retrieval system