KEGG   Condylostylus longicornis: 129612697
Entry
129612697         CDS       T09756                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
clon  Condylostylus longicornis
Pathway
clon03440  Homologous recombination
clon03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:clon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    129612697
   03450 Non-homologous end-joining
    129612697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clon03032]
    129612697
   03400 DNA repair and recombination proteins [BR:clon03400]
    129612697
DNA replication proteins [BR:clon03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    129612697
DNA repair and recombination proteins [BR:clon03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     129612697
    BRCA1-C complex
     129612697
   NHEJ (non-homologous end-joining)
    MRX complex
     129612697
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SMC_N SbcC_Walker_B AAA_29 AAA_21 AAA_15 HIP1_clath_bdg HALZ ABC_tran AAA_16 Mce4_CUP1
Other DBs
NCBI-GeneID: 129612697
NCBI-ProteinID: XP_055382426
LinkDB
Position
Unknown
AA seq 1308 aa
MSSIVQLTIQGIRSFGTKAEDKQSITFSSPVTLILGANGCGKTTVIECLKYALTGELPPG
SDHGKSFVHDPKIFDAMECIGQVKLQVKNIRGQTLTVTRAVKITQKRGRAGPNFMALDST
ITYGNNEGQSISKRAIDVDNELERFMGVSKAIINNVIFCHQENACWPLDEPKKLKEKFDA
IFGTSNYDKAIEKMIKIKKLQQDSLKLKRNDLRYAEVRKKEADTKNLDLANSRQKKEDLL
KQSDQFDNDLIPVEERIKAVQKIEIEIGSYNGERIKLKADIKSCEEHIKSLTSKIKKEFD
GSVDQIDIEIRNFHENMEEKKSELKSLEDLLNRIKNQERKLRSSLTDLEHKRSTLLSKRQ
LEQEYVGKRAKKISDLCEKLEIPVSIDIENAKEDEVLNIYEQIGKAFVLEDKKISELSEK
HDKTENEKQTEIDKCRENKVTIESDIQSKRGQKSKLQQDLKKVEDEINQNEASAKKLASI
TAEVEKADKLLKTFEEKVNFEDKEREINDKKSDIKTKEEQYRELDKKLTFLNSISKKVIE
VNLKEQQLEKKEQEIRKVKNKHGSNIKTIFPDKEIESNYKKQFQNINEEIQKQIKDLQEK
ENENRLKLNSLEVERKNKREELSKWENDHQQNSDKIFDKCHGTPYEEILQRSKENVEKYQ
LELGALKSSESMFKKYMKNINDDPCCPLCHKNLSNDEATDLTAEMAEEIRRVPANIKKTE
QSLKKEQHNYESLMGLRSIIDKNTKLEEDIPKRKEDLKKLEDQLSELSKDIESCQLLIAE
PSSNLDLVNSMLGDMALLDEALKDASRIKDDLQSLKEKLPKEAENLNIDDIQTEKDTVST
ELDTNRKELEKLENDYRTQKSDITRLKETKLALKDNQIKLQEGIQALPQLKSRYDEISKN
LDLLSKEIETLEEELNPLKSKLDNLIKEKENLKTENRTILNKSKSKLDGLKKINHEVESL
NKELKNLAEENLEEEIENLKELFRRNMNEQAENGKENTQATEKIENLKSIISNQELAERD
LKDNRELKVLQKKNIRLKDQLEAVLKQMGDLSMDTASKERAELIKKRDAIVTKRGQLRGQ
IGEIESQIKKLDAELKDPKFKDALKNYRRLFYEVEILEQVVHDLNEYHFALDRALSQYHK
EKMQKINRLIREFWRQIYRGNDIDYIEIKTESEDTKSSAAKRRTFNYSVVQSKNNTKLEM
RGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNIISLCETLSRIIEDRQ
SQCNFMLIIITHDEEFISALGKIRNYHKVSRNAEGKSVVRQVKLATEM
NT seq 3927 nt   +upstreamnt  +downstreamnt
atgtcatctattgtgcagttaacgatacaaggaataaggagttttggaacgaaagctgaa
gataaacagagtataacattttcttctccggtaaccttaattcttggagctaatggttgt
ggcaaaacaactgtaatagaatgtttgaaatatgcattaacaggagaattaccacccggc
agtgatcatggcaaaagttttgttcatgatcccaaaatttttgatgcaatggaatgtatt
gggcaagtaaagttacaggtcaaaaatattcgtggacaaactctcacggtaaccagggca
gttaagataactcagaaacgtgggcgtgctggtccaaattttatggctttggattctaca
attacctacggtaataatgaaggtcaaagcataagtaaaagagcaattgatgttgataat
gagttagaacggtttatgggagtttcaaaagctataataaacaacgttatattttgccat
caagagaacgcctgctggcctttagatgagcctaaaaaattaaaagaaaaatttgacgca
atttttggtaccagtaattatgacaaagctatagaaaaaatgattaaaataaagaaacta
caacaagattcgctgaaattaaagcggaatgatttaagatatgctgaagtcagaaaaaag
gaggcagatactaaaaatttagatttggctaattcaagacaaaaaaaagaagatttgctg
aaacaaagtgaccaatttgataatgatctgataccagttgaagaacgaataaaagctgtt
cagaaaatagaaatagaaataggaagttataatggagagagaatcaaattaaaagcagat
ataaaaagttgcgaagagcatattaaatctcttacgtcaaaaatcaaaaaagaatttgat
ggcagtgttgatcaaatagacatagaaattcgtaattttcacgaaaacatggaagaaaaa
aaatcagaattgaaaagcttggaagatttgcttaatcgtattaaaaaccaagaacggaaa
cttcgatctagtttaactgacttggagcacaaacgttctactctgttaagtaaacgtcaa
ttagaacaggaatatgtgggtaaaagagcaaaaaaaatttctgatctttgtgaaaaacta
gaaatacccgtatccatcgatattgaaaatgctaaggaagacgaagttttaaatatttat
gagcaaattggtaaagcttttgtattggaagataaaaagatctcggaattatccgaaaag
cacgacaaaactgaaaatgaaaaacaaactgaaattgataaatgtcgggaaaataaagtt
acaattgaaagtgacatacaatctaagcggggacaaaaatcaaaactgcaacaagattta
aaaaaagtcgaagacgaaataaaccaaaacgaagcaagcgctaaaaagttggcatctata
actgccgaggtagaaaaggctgacaaattattaaaaacttttgaggaaaaggtaaatttt
gaagataaggaacgtgaaataaacgataaaaaatctgatattaaaacaaaagaagagcaa
tatcgcgagttggataaaaaattgacgttcttaaactcaatttccaagaaagtgattgag
gttaatttaaaagagcaacaacttgaaaaaaaagaacaggaaattcgaaaagtgaaaaac
aaacacggaagtaatattaaaactatatttcctgataaagaaattgaatcaaattacaaa
aaacaatttcaaaatattaatgaagaaatccaaaaacaaattaaagatttacaagaaaaa
gaaaatgaaaatcggttgaaattgaacagtttagaagtagagcgcaaaaataaaagagaa
gaattgtccaaatgggaaaacgatcatcaacaaaattctgataaaatatttgacaaatgt
catggtactccatatgaggagatattgcaacgttccaaagaaaatgtggaaaaatatcaa
ttggagctcggcgccttgaaatcttcagaatcaatgtttaaaaaatatatgaaaaatatt
aatgacgatccatgttgcccattatgtcataaaaatttatcaaatgatgaggcaaccgat
ttaactgctgagatggcagaagaaatacgcagagttcctgccaatattaaaaaaacagag
caatccttaaaaaaggagcaacacaattacgagtctttaatgggattaaggtctattatc
gacaaaaacacaaaacttgaagaggatataccaaaaagaaaagaggatttgaagaagtta
gaagatcaattatctgagctatcgaaagatattgaatcatgtcagttgttaattgctgaa
ccatcttctaatttagatttggttaattcaatgttaggcgatatggctttgctagatgaa
gcattgaaagatgcttctagaattaaggatgacttgcaaagtttaaaggaaaaattacca
aaagaagcagaaaatttaaatatcgatgatattcaaactgaaaaggatacagtatctacg
gagctagacacaaacagaaaagaattagaaaaattggaaaatgattatcgtacacaaaaa
agtgatataacaagattaaaagaaacaaaattggcattaaaagataatcaaatcaaatta
caagaaggaatacaagcattacctcaactcaaatctcgttacgatgaaatttctaaaaat
ttagatttactttctaaggaaatagaaactttggaagaagaattgaaccccttgaagtca
aaacttgataatttaattaaggaaaaagaaaacttaaaaactgaaaatcgtactatattg
aataaatctaagagcaaactagatggtttgaaaaaaattaatcacgaagttgaaagtctg
aataaggaactgaaaaatttggcggaagaaaatttagaggaagaaatagaaaatttgaag
gaattatttagacgtaatatgaacgaacaagccgaaaatggaaaagagaatactcaagca
acagaaaaaattgaaaatcttaagtccataatatcaaatcaagaattagcggaaagagac
ctaaaagacaatcgagaattgaaagttttgcagaagaaaaatattcgactgaaagatcaa
ttggaagctgttttaaaacaaatgggtgatttgagtatggacactgcatcaaaagaacgt
gctgaactaataaaaaaaagagacgcaatagtgacaaaacgtggacaattacgagggcaa
atcggcgaaattgagagtcaaatcaaaaaacttgatgctgaattaaaagatccgaagttt
aaagatgcattaaaaaattatcgaagattattttatgaagttgaaatattggaacaagta
gttcatgatttaaacgaatatcattttgctttagatagagcattaagccaatatcataaa
gaaaaaatgcaaaaaatcaaccgtcttatacgtgaattttggcgtcagatatatcgtgga
aatgatatagattatattgaaataaaaactgaaagcgaagatacaaaatcatcagcggct
aaaaggcgtacatttaattacagcgttgtgcaaagcaagaacaacactaaattagaaatg
cgtggccgctgtagcgctggacaaagagttttagcctcattaataattcgtatggcatta
gctgaaacatttagttcaaattgtggcgttttagcattggatgaaccaaccaccaatcta
gatcgtaataatataatttctttatgtgaaacattaagtcgtatcatagaagatcgtcaa
agtcaatgcaattttatgcttattataattacacatgatgaagagtttatatcagcttta
ggtaaaattcgaaattatcataaagtttcaaggaatgcagagggaaaaagcgttgtcaga
caagtaaaattggcaactgaaatgtaa

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