Condylostylus longicornis: 129613651
Help
Entry
129613651 CDS
T09756
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
clon
Condylostylus longicornis
Pathway
clon03022
Basal transcription factors
clon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129613651
09124 Replication and repair
03420 Nucleotide excision repair
129613651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clon03021
]
129613651
03400 DNA repair and recombination proteins [BR:
clon03400
]
129613651
Transcription machinery [BR:
clon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129613651
DNA repair and recombination proteins [BR:
clon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129613651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DDE_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
129613651
NCBI-ProteinID:
XP_055383779
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MTTSSEDVLLQMGEVRYKKGDGTLYIMNERLAWMAENRDTVACSHRFQDIKMQKISPEGK
PKVQLQVVLHDGNSSTFHFVNRLGQAAQLADRDKVKELLQQLLPNFRRKVDKELEEKNRI
LTENPHLLQLYKDLVITQVLSSEEFWETHAKDYAQKNNSKKQEIGVSGAFLADIKPQTDG
CNGLKYNLTADIRDCIFKTYPAVKKKHLENVPSKMTEQEFWTKFFQSHYFHRDRITAGTK
DIFSECGKIDDQALKAAVQQGSGDPLLDLKQFEDKALQDSFKSAFSDNRKSNSGNIVHQS
MIKRFNQHSIMVLKTCTDISTTPQTNPLSDISANKGDLNLNGLKEKKHKSNHNNNANTST
SNPSSRRNSTDSCLSTSPVKAKKQRLIEKICLDDLGTPLVDAIDDMNGKQTNKESLHLNL
DKVERYLHGPVPVSYSDHVEELQGLEVTQYRICEESDMWSQRTPHKVLVSAKSAVNALGE
LSPGGALMRSFQEPSSQLVPPEFEKDLRNLYLSLSELLKHFWSAFPPTTPELENRAVRMH
EALQRFKMAKLTVFEDRAMRELSPLGATLTQHLNQLLQSAGRKFATWQERRMRLHR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgacaactagtagtgaagatgttcttttgcaaatgggtgaggttcggtacaaaaaaggt
gatggaaccttatatataatgaatgaacggcttgcatggatggcggaaaaccgagacact
gtagcttgttctcataggtttcaagatattaaaatgcaaaaaatatctcctgaaggaaaa
ccaaaagttcaattacaagtggtcttacatgatggcaatagctcaacatttcattttgtt
aatagactagggcaagcagcgcaattagctgatcgagataaagtgaaggaattgcttcaa
caacttttgccaaattttcgtcgtaaagttgataaagaattagaagaaaaaaatcgaata
ttaacagaaaacccacatttactgcaactgtataaggacttggtgataactcaagtatta
tcaagcgaagagttctgggaaacacatgccaaagattatgcacaaaaaaataattctaaa
aaacaagaaattggagtttccggagctttcttggcagacataaaaccacaaacagatggc
tgcaatggtttgaagtataatttgacagctgatatacgtgactgtatttttaaaacatat
ccagctgttaaaaagaaacatttagaaaacgttccatcaaaaatgactgaacaagaattt
tggacaaaattttttcaatcacattattttcatagggatcgaataacggcggggaccaaa
gatatattttcagaatgtggtaagatcgatgatcaagctttaaaagctgccgtacaacaa
ggatccggcgatcccttactagatttaaaacaatttgaggataaagcattacaagatagc
tttaaaagtgcatttagtgataataggaaatcaaatagtggaaatattgttcatcaaagc
atgataaaacggtttaatcaacattcaattatggttttaaaaacctgtacggacattagt
acaacaccgcaaactaatcctttgtcagacatatctgctaacaaaggtgatttaaatttg
aatggccttaaagaaaaaaagcataagtctaatcataacaataatgcaaatacaagtaca
agtaatccttcatctcgcagaaattctactgattcttgtttgtctacttctccagtaaaa
gcaaaaaagcaaagattaatagaaaaaatttgtctcgatgatttaggaacaccacttgtt
gatgccattgatgatatgaatggaaagcaaacgaataaagaatcgttgcatttaaatcta
gataaggtggaaagatatttacatggtccagttcctgtatcttattctgatcatgttgaa
gaattacaaggtttagaagtgacgcaatatagaatatgcgaggaatcggatatgtggagt
caaaggaccccccacaaagttttagttagcgcaaaatctgctgttaatgcattaggtgaa
ttaagtcccggaggtgctttaatgagaagttttcaggagccatcttcacaacttgtgcca
ccagaattcgaaaaggatcttagaaatttatatttgtctctgagtgaattattaaaacat
ttttggagtgcttttccacctacaacaccagagttggaaaatcgtgctgttcgaatgcat
gaagcgttacaacgttttaaaatggcaaaattaactgtttttgaggatcgtgccatgcgt
gagttatcaccactaggtgccactttaacacaacatttgaatcagttactacagtctgct
ggacgaaaatttgcaacttggcaagaaagaagaatgcgtttgcatcggtag
DBGET
integrated database retrieval system
