Condylostylus longicornis: 129613743
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Entry
129613743 CDS
T09756
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
clon
Condylostylus longicornis
Pathway
clon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129613743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clon03041
]
129613743
03009 Ribosome biogenesis [BR:
clon03009
]
129613743
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129613743
Spliceosome [BR:
clon03041
]
Complex A
U1 snRNP components
U1 related factors
129613743
Complex B
129613743
Ribosome biogenesis [BR:
clon03009
]
Eukaryotic type
Pre-60S particles
Helicases
129613743
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
129613743
NCBI-ProteinID:
XP_055383913
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MFHQHGSMVFQTRPDRAHQQRNSNMNPGLSDANMQNGSMFNPIIYQNGNQPGGYVDFMNP
QNQRRNGYSDYSNVMGNFQKSSPMNRGRQHIVPGGGCGGPPPNYNMKSNMNGGPNGGNMY
QNINYQNRKLGFVPNKSNKFNNNGIGTNAGMQNGIDINKYKNNDNDEGDQSSQENELQKR
QQQNHYASMNKNQIPLGIMSKEERAKIQSDKAKNPGKNLIKPIWENLKPFQKNFLVAHPK
TSALTENDVTDMRTDLEITVIGNSVPKPNMNFEEACLPDNVVTEMKKQGFLKPTAIQSQG
WPIALSGRDLVGIAQTGSGKTLAYMLPAMVHISHQPRATRGEGPIVLVLAPTRELAQQIQ
TVTRDYGCTSRPIIRHTCIFGGSPKMPQARDLERGVEVVIATPGRLIDFLEKGITNLKRC
TYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLNDYIQINI
GSLNLSANQNIRQMIEVCSEEEKEAKLVQLLKDIASDITSKVIIFVETKKKVEDILKTIR
RENFVATSIHGDKSQAERDLVLQDFRNGKSVILVATDVAARGLDVEDVRYVVNYDYPNSS
EDYIHRIGRTGRCQQLGTSYTFFTPGNAKQAKELLAVLGESGQKPPQKLLDLARLIGNNG
KVRPNMNSNMMNGMVKKNWQTDKNRMDQQQKPNINYQGNTYLSQKQWNNPRSYNGPNSQM
NNGTYNVNEQNVYSNQKPVWRNNPNGSDNLNSKSIDDQKQNKIGDGGKFFRPRINKRENF
NKNFNIEQSPNFMNGNEQVNQNYQFQKVFHYNNRQNNGIYSRYNTNNMEFNSNFNQMNNN
GAMSPPYIQQVQQHHSGGNFNNKKRNEIHGNYQQQYSTQNYNNSNNNNNKRGDIINTIEN
NNDGITNNNQQNSEQNYSPQSSSPPSMSPNKTETVATTNISGGENKNQQQQHVQQNFSGG
ISPTQITPANASKTLQTGGNNHQAAPAAPAIPPYMIDTQVGMQNVMASYGQYPSTAAYYH
FVQPAAETVQQ
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaccaacatggtagtatggtatttcaaacaaggccagatagagcacatcaacaa
cgcaattcaaatatgaatcctggtttatcagacgcgaatatgcaaaatggatctatgttt
aatccaataatttatcaaaatggtaaccaacccggaggttatgttgattttatgaatcca
caaaatcaacgacgtaacggctattcagattattcgaatgtaatgggaaattttcaaaaa
tcgagtccaatgaaccgtggcagacagcatattgttcctggtggcggttgtggtggtcca
ccgcctaattataatatgaaatcaaatatgaatggtggaccaaatggtggaaatatgtat
caaaatattaattatcagaacagaaaacttggtttcgtgccaaacaaatcaaataaattt
aataataatggtattggtactaatgctggtatgcaaaatgggatagatataaataaatat
aaaaataatgacaacgatgagggtgatcaatcatcacaagaaaacgaacttcaaaaaagg
caacagcaaaatcattatgcaagcatgaataaaaatcaaatacctttaggtataatgtca
aaagaagaacgcgccaaaattcaaagcgataaagctaaaaatccaggaaaaaatttaatt
aaaccaatttgggaaaatcttaagcctttccaaaaaaactttttagttgcacacccaaaa
acttcagcattaactgaaaatgatgtcaccgatatgcgtactgatttagaaataacagta
attggaaattcggtaccaaaacctaatatgaattttgaagaagcttgcttaccagacaat
gtggttactgaaatgaagaaacaaggatttttgaagcctactgcaattcagtcccaaggt
tggcctattgcattatctggtcgtgatttggtgggaatagctcaaacaggatctggaaaa
acattggcttatatgttaccagctatggttcatatatcacatcaaccacgggcaactcgt
ggagaaggaccaattgtgttagtattagcaccaacaagagaacttgctcaacaaattcaa
actgtgacacgtgattatggttgtacttctcgacctataattcgtcatacttgtatattt
ggtgggtcaccaaaaatgcctcaagccagagatttagaacgtggcgttgaagttgttata
gccacacctggcagattgattgacttccttgaaaaaggcataacaaatttgaaacgctgc
acttatttagttttagatgaggctgatcgtatgcttgacatgggatttgaaccacaaata
cgtaaaataatcgaacaaatacgtccagatcgtcaagtattaatgtggagcgcgacgtgg
ccaaaagaagttcaagctttagctgaagactttttgaatgattatattcaaatcaacatt
ggatcactgaatttatcagctaatcaaaatattcgccaaatgattgaggtttgctccgaa
gaagaaaaggaagcaaaattagttcaattattaaaggatattgcatcagacattaccagt
aaggttattatttttgttgaaaccaaaaagaaggttgaagacattttaaaaacgattcgt
cgcgaaaattttgtagcaacatcaattcatggggataaatctcaagcggaaagagatcta
gttttacaagattttcgtaatggaaaatctgtaattttagttgcaactgatgttgcagct
cgcggtttagatgtggaagacgtaagatatgtggttaattatgattatccaaattcttcc
gaagattatattcatcgtatcggtcgaaccggtcgttgccaacaattgggtacatcttat
acattctttactccaggaaatgctaaacaagctaaggaattgttagctgttttgggtgaa
tctggtcaaaaaccaccgcaaaagcttttagatttagcacgtcttattggcaataatgga
aaggtacgacctaatatgaatagtaatatgatgaatggaatggtgaagaagaattggcaa
acagacaaaaatagaatggatcaacaacaaaaaccaaatataaactatcaaggtaataca
tatttgtcacaaaaacaatggaataatccaagatcatacaatggtccaaattctcaaatg
aataatggcacatataatgttaatgaacaaaatgtgtattcaaatcagaagcctgtgtgg
cgaaataatccaaatggatcagataacttaaattcaaaatctattgatgatcaaaaacaa
aataaaattggtgacgggggaaagttttttcgaccacgtataaataaaagagagaatttt
aataaaaatttcaatattgaacaatcaccaaattttatgaatggaaatgaacaagttaat
caaaattatcaattccaaaaagtattccactataataatcgtcaaaataatggtatttat
tcacgttataatacaaataatatggaatttaattcaaattttaatcaaatgaataataat
ggtgctatgagtcctccttatatacaacaagtgcaacaacatcatagtggcggaaatttt
aataataaaaaacgtaatgaaattcatggaaattatcaacaacaatattcaacacaaaac
tataacaatagtaataataataataataaacgtggtgatataataaatacaattgaaaat
aataatgatggtattacaaataataatcaacaaaatagtgaacaaaactactcaccacaa
tcttcttcaccccctagtatgagtcctaataaaacagaaaccgttgcaacaacaaatata
tctggtggtgaaaataaaaatcaacagcaacagcatgtacaacaaaattttagtggtggt
atttctccaacgcaaataactccagccaatgcttctaaaacacttcaaactggaggtaat
aatcatcaagctgcccccgcagctcctgcaattccaccatatatgattgatacacaagtt
ggaatgcagaatgttatggcttcatatggtcaatatccatcgacagcagcgtattatcat
tttgttcaaccagctgcagaaacagttcaacaataa
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integrated database retrieval system
