Condylostylus longicornis: 129614024
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Entry
129614024 CDS
T09756
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
clon
Condylostylus longicornis
Pathway
clon03030
DNA replication
clon03410
Base excision repair
clon03420
Nucleotide excision repair
clon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129614024
03410 Base excision repair
129614024
03420 Nucleotide excision repair
129614024
03430 Mismatch repair
129614024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clon03032
]
129614024
03400 DNA repair and recombination proteins [BR:
clon03400
]
129614024
DNA replication proteins [BR:
clon03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129614024
DNA repair and recombination proteins [BR:
clon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129614024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
AAA_22
Rad17
AAA_14
RuvB_N
BRCT_2
AAA_33
AAA_16
PTCB-BRCT
RCF1-5-like_lid
nSTAND3
AAA_18
AAA_30
AAA_5
AAA_17
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
129614024
NCBI-ProteinID:
XP_055384368
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MSRDIRSFFAPKNSSSKVVKTATELPKRRAIALSSDDDDDKDQVKGTPKEKREKTKVVKK
RRVIESDDDDIVTETPTKPKNKKPNLSKLLENLTPKYKKETTEEIEAKFGHVPKRIERKK
APPKIKSIEHSDKNSDIIALDDDFNDSLIKLSENEFSENNLNKKNDVESPTKNAFVTENS
KNTKKSPTKSSKNEIVKDNDVEKEKTVLENAVKSPSSKTRIASSKDNNDKKNLDVKKSLF
DKSFESESDRTPKTKSTKKSDMDSSILTDEDRHERKRMSAILYQKYKNRSSAINPGSKEI
PKGKPNCLSGLTFLVTGILESMERDEANQVIKDFGGKVMSTVGKRLNYMIVGEEAGPKKL
ATAEDLGVKIISEDGLFDLIREKSNMDISNKVTTSPKDKKHVPKVVENSKEKSKSPQIKT
KKEKTEEKSLKRETEEKVMKVPNEKIQEKSSEKRKINDNEEYVKVKKEKKESPQKMQDIS
PKKTEIKEISKVDNSMLSWVDKYKPTNLKQIIGQQGAASNCVKLQNWLSKWYINHDGKKK
LQKPNPWAKNDDGSYYKAALLSGPPGIGKTTTAHLVCKELGFDVVEFNASDTRSKKLLKE
EVSELLSNKSLYGYFNGQSVSKKHALLMDEVDGMAGNEDRGGISELISLIKDSSIPIICM
CNDRNHQKMRSLVNYCYDLRFNKPRLEQIRGPLMSICFKEKLKLPSGKIDEIISATNNDI
RQTINHLSLLAAGDESKIEVKEKERTAEKDLKLGPWDVVRKVFTVEDQKKMNIHEKSDLF
FNDYSLGPLFVQQNYLQVLPDGPKDKIPEKVALAADYLSLGDLIDKRIRSNSAWSLLPTQ
AMFSSVMPGECMSGHFVGQINFPGWLGKYSKANKRKRLAQELHDHTRIRTSGSRLSIRLD
YAPFLLDSIVRPLKKDGIDGVQSSLNIIKEYRLLREDIESLIELTTWPGRKNPMDAVDGK
VKAALTRAYNKEVLAYSYSAMAGVKKKKAEKMDDINEIDEENVELGGGETIISDNEDDDN
IENDALIKAKKKPASKAGTSKETKVDSNKTTKKSKTKK
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgatataagatcattttttgcacccaaaaattcttcatccaaagtggtaaaa
actgcaaccgaactaccaaaacgaagagcaattgctttatcaagtgatgatgatgacgat
aaagatcaagtaaaaggaactccaaaagaaaaacgtgaaaaaaccaaagttgtgaaaaaa
cgccgtgttatagaatctgacgatgatgatattgtaactgaaacacccacaaagcctaaa
aataaaaagccgaatttgtcaaaacttttggaaaatcttacaccaaaatataaaaaagaa
actacagaagaaattgaagcaaaatttggtcatgtaccaaaacgaatagaaagaaaaaag
gctccgcctaaaataaaatcaatagaacattcggataaaaattcggatattattgccctg
gatgacgattttaatgactcattgattaaattaagtgaaaatgaattttctgaaaataat
ctaaataaaaaaaatgatgtagaaagtcccacaaaaaatgcatttgttacagaaaactca
aaaaatacaaaaaaaagtccaacaaaaagttcaaaaaatgaaattgtaaaagataatgat
gttgaaaaggaaaaaaccgttttggaaaatgctgttaaaagtccttcaagtaaaacaagg
atagcttcctcgaaagacaataacgataaaaaaaatttggatgttaaaaaatctttgttt
gataaaagtttcgaaagtgaatctgatcgtactcccaaaacaaaatcaactaaaaaatct
gatatggacagtagcattctaactgatgaagatcgccatgaacggaaacgaatgagtgcg
attttgtatcagaaatataaaaatcgttccagtgctattaatccaggttcaaaagaaatt
cctaaagggaaaccaaattgtttatctggactaacatttcttgtaaccggtatattagaa
tcaatggaacgagatgaagcaaatcaagttataaaagattttggaggcaaagtaatgtca
actgttggtaaacgtctaaattatatgatagttggagaagaagctggtcctaaaaaactt
gcaactgctgaagatttaggtgtgaaaataatttcagaagatggactttttgatttaatt
agagaaaaatctaatatggatatttcaaataaagttacaactagtccaaaagataaaaaa
catgttccaaaagtagtagaaaattcgaaggaaaaaagtaaaagtcctcaaattaaaaca
aaaaaagaaaaaactgaagaaaaaagtctgaaaagagaaactgaagaaaaagttatgaaa
gttccaaatgaaaaaattcaagaaaaatctagtgaaaaaagaaaaattaatgataacgaa
gaatatgtaaaagtaaaaaaagaaaaaaaagaaagtcctcaaaagatgcaagatatttca
cccaagaaaactgagatcaaagaaatatccaaagttgataatagtatgttatcatgggtt
gataaatataaaccaacaaatttgaaacaaattattggtcaacaaggagctgctagcaat
tgcgttaagttacaaaattggttatcgaaatggtacattaatcacgacggtaagaaaaaa
ttacaaaaacctaatccgtgggctaaaaatgatgacgggtcgtattataaggctgcctta
ttatccggacctcctggaataggaaaaacaacaaccgctcatttagtttgcaaagaacta
ggctttgatgttgtggaatttaatgcttccgacactcgaagtaaaaagcttcttaaagaa
gaagtatcagaattattatcaaataaatcattatatggttattttaatggccaatctgtg
tctaaaaagcacgctctattgatggatgaagttgacggtatggctggaaacgaagatcga
ggtggtattagtgaactaatctcattaataaaagattcatcaattccgataatttgcatg
tgcaatgatagaaatcatcaaaaaatgagatctctggttaactattgttatgatttaaga
tttaataagccacgtttagagcaaatccggggccctttgatgtcaatatgttttaaagag
aaattaaaattgccttctggtaaaattgatgaaataatttcagcaaccaataatgatatt
agacagactataaatcatctgtcattacttgctgctggtgatgagtctaaaattgaagtt
aaggaaaaagaaagaactgcagaaaaggatttaaaattaggaccatgggatgtagtgcga
aaagtttttacagtagaagatcaaaagaaaatgaatattcatgaaaaaagtgatttgttt
tttaatgattatagtttaggtccattgtttgttcaacaaaattatttacaagttttacct
gatgggccaaaagataaaattccagaaaaagttgcgttagctgctgattatttaagttta
ggagatttaatagataaacgtatacgatctaattccgcttggagtcttctaccaacacaa
gctatgtttagttcagttatgccaggtgaatgcatgtcagggcattttgttggtcaaatt
aatttcccaggttggttaggtaaatattcaaaagcaaataaacgtaaacgcttggctcaa
gagttgcatgatcatacaaggataagaacttctggatcaagactttcaattagattagac
tacgcgccattcctattagattctatagtaagacctttaaaaaaggatggtattgatggc
gtacaaagttcacttaatattataaaagagtatagactattaagagaagatatagaatct
ttaatagaattgacaacatggcctggtcgtaaaaatccaatggacgctgtagatggaaaa
gttaaagcggctttaacaagagcttataacaaggaagttttagcctattcatattctgca
atggctggtgtcaaaaagaaaaaggcagagaaaatggatgatattaatgaaattgatgag
gagaatgttgaacttggcggaggagaaactattatttctgataatgaagatgatgataat
attgaaaatgatgcattaatcaaagctaagaaaaaacctgcatccaaagctggaacatca
aaggaaacaaaagtagattccaataaaactactaaaaaatccaaaacaaagaaatag
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