KEGG   Condylostylus longicornis: 129614273
Entry
129614273         CDS       T09756                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
clon  Condylostylus longicornis
Pathway
clon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129614273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clon03041]
    129614273
Spliceosome [BR:clon03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    129614273
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd PRP4 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_EML NBCH_WD40 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_IFT140_1st eIF2A Beta-prop_SPT8 Beta-prop_HPS5 WD40_like Ge1_WD40 WD40_RFWD3 WD_LRWD1 Beta-prop_WDR75_2nd LUC7 MYO6_lever PurA Nha1_C
Other DBs
NCBI-GeneID: 129614273
NCBI-ProteinID: XP_055384777
LinkDB
Position
Unknown
AA seq 523 aa
MSDDEELQYMKRNKTIHYGSLEESERKKQALENIDSDDDFGPPEAKKPMLAANIPASLNT
TTIGNVQVSNDYFDIENEISKDKQALLEEFERKKRARQINVSTDDNEVKKNLRQLNEPIC
FFGEGPAERRRRLKDLLASLGENAIKQKQHEEEERKQLQKEQETTWYHEGPDALRLARLW
IADYSLPRAKNRLELAKQQAELPAATKAGRMVELQKRIQSLVPLCSQVGDTRPVSDCTFS
DDSKLLLTSSWSGLCKLWSVPECKELQVLRGHVAYVGGVCFRPGVYFDEKNECSMASGGH
DGAVKLWSYGSEESIADITGHMPSRVSKVKFHPSGRFLATACYDSSWRLWDLHQKQEVLH
QEGHAKSVHCLAFQCDGSVIVTGGLDAFGRVWDLRTGRCIMFLEGHLGNIYGVDFSPNGY
HIVTGSCDNTCKIWDLRKRQHVYTIPAHTNLISDVKYQKDGGNFLVTGSYDNTTKLWSNK
TWQPLKTLQGHDGKVMAVDISPNSQYIVTTSYDRTLKLWAPEN
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtctgatgatgaagagctacaatacatgaaaagaaataaaacaatccattatggatcg
ttggaagagagtgaaaggaaaaaacaagctttagaaaatattgattctgatgatgatttt
ggccctccagaagcgaaaaagccaatgttagcagcaaatattccggcttcactaaataca
actactattggaaatgttcaagtttcgaacgattattttgacatagaaaatgagatatca
aaagataagcaagctttattagaagagttcgaacggaaaaaacgtgcacgtcaaattaat
gtcagtactgatgataatgaagttaagaaaaaccttcggcagttaaatgaaccaatttgt
ttttttggtgagggtcctgccgaacgcagacgacgtttaaaggacttattagccagtttg
ggtgaaaatgctataaaacaaaagcaacatgaagaagaagaaagaaagcaattacaaaaa
gaacaagaaacaacttggtatcacgaaggaccagacgcattaagattagctaggctatgg
atagcagattattcattgccaagagcaaaaaatagactagaattagcgaaacagcaagct
gaattaccagctgcaaccaaagctggtcgtatggtggaactgcaaaaaagaatacaatct
ttagttccattatgcagtcaagttggtgatacaagaccagttagtgattgcacatttagt
gacgattcaaaattattattaacctcaagttggagtggattatgtaaattatggtccgta
cctgaatgtaaagagttacaagtattgcgaggtcatgtggcttatgtgggcggtgtttgc
tttcgacctggtgtttattttgatgaaaaaaatgaatgttctatggctagtggtggtcat
gatggtgctgtgaaattatggtcatacggaagtgaagaatctatagcggatataactggt
catatgccgtctagagtttcaaaagtaaaatttcatccttctggtagatttctggcaact
gcctgctatgattcttcatggcgcttatgggatttacatcaaaaacaagaagttttacat
caagaaggtcatgcgaagtcagttcattgtttagcatttcagtgcgatggtagtgttatt
gttacaggtggattagatgcatttggtagagtttgggatttaagaactggtaggtgcatt
atgtttctggaaggtcatttaggaaatatatacggtgttgacttctctccaaacggttat
catattgttaccggtagttgtgataacacttgtaagatttgggatctgagaaaacgacaa
catgtttatactatacctgcacatacaaatttaatatcggatgttaaatatcaaaaagat
ggtggaaactttcttgttacaggaagctacgataatacaacaaaattgtggtccaataaa
acgtggcaacctctgaaaacgctgcaaggtcatgatggtaaggtaatggctgtagacata
tcaccgaattcacaatatattgttacaacgtcttatgatagaacgcttaaattatgggca
ccagaaaactaa

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