Condylostylus longicornis: 129614308
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Entry
129614308 CDS
T09756
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
clon
Condylostylus longicornis
Pathway
clon03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129614308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clon03021
]
129614308
03036 Chromosome and associated proteins [BR:
clon03036
]
129614308
Transcription machinery [BR:
clon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129614308
Coactivators
SAGA/TFTC/STAGA complex
129614308
Chromosome and associated proteins [BR:
clon03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129614308
STAGA complex
129614308
TFTC complex
129614308
SAGA complex
129614308
SLIK complex
129614308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
TFIID_NTD2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_HPS5
Ge1_WD40
Beta-prop_VPS8
Beta-prop_RSE1_2nd
Beta-prop_DCAF4
WD40_like
Beta-prop_NWD2_C
PH_11
WDR54
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
129614308
NCBI-ProteinID:
XP_055384828
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MSEKQDKRELFALLKLMRKYNLKQTEDLLKQEANLTEDLDEELLAKTPPPLPDEENPDML
FGIYEDLCNFIEESLDIYKHELSMVLYPLLVHIFIKLMDCGCEEKAHKLIEEFGPQQLYY
YQNDIKVLSEIRKVSQMETCDLITALKNEKFTIRISRDSLSLFKRHTQDKRFDLVNQIVS
KYFHFDLYEGAARNKEQCEATAGAITGEAKRTDNKIRVYYGLLKDIDFQSLNTPPDEEEE
VDGDGIDRPKKKKPKKDPLFSKKSKLDPNAPPYDRIPLPELKDADKMEKMKAMREALKRV
PLGKNSLPSCCFYTVLNGSGTVTCAEISDDSTMLALGFSDSNIKIFSLTPSKLREIKSAD
QLKDIDRDADDVLVRMMDDRTAESARNLYGHCGPVYRCAFSPEKVLLLSCSEDSTLRLWC
MHTWTCIVVYKGHLHPIWDVRFAPHGHYFASCSMDKTARLWSTDSHQPLRIFTGHLSDVD
CVQFHPNSNYIATGSSDRTVRLWDCLSGQSVRLMTGHKSTICCLSFSKCGRYLASGSSDN
RVLIWDLSHGQLVAQCKHTAALHTITFSRDGTLLASGGLDCVLALWDFLKLIEDYSISSN
QSSHNPEVLEGESYLLRSFSTKSSPFLNLHFTRRNLLLAVGFYKS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaaacaagataaaagggaattatttgctttattaaagttaatgcgaaagtat
aacttgaagcaaactgaggaccttttaaagcaagaagcgaatttgacagaggatctcgat
gaagaattgctagctaaaacacctccaccactgcctgatgaagaaaaccctgatatgctc
ttcggaatctacgaagacctgtgcaattttatcgaagagtctttggatatatataaacac
gaattatcaatggtcttatatccgctattagttcacatatttattaaattaatggattgt
ggatgtgaggagaaagcgcacaagctgatagaagaattcggaccccaacagttgtattat
tatcaaaacgatattaaagttttatcagaaatacgaaaggtttctcaaatggaaacttgc
gatttaattactgctttaaagaacgaaaaatttacaattcgtatttcgcgggactctttg
tctttatttaaacgtcatacacaagataagagattcgatttagttaatcagatagtatcc
aaatattttcattttgacttatacgaaggtgctgcaagaaataaagagcaatgtgaagca
actgctggtgccataactggcgaagctaaaagaacggacaacaaaattagagtttattat
gggttgctaaaagatatagattttcaaagcttaaatacgccacctgacgaagaggaggaa
gttgatggagatggaattgatagaccaaaaaaaaagaaacctaagaaagatccattattt
tcgaaaaagtcaaaattggatccaaatgctcccccttacgacagaattcctctgccagaa
cttaaggatgctgacaaaatggaaaaaatgaaagcaatgcgagaggctttaaaacgtgtt
cccttagggaaaaacagtttaccgtcctgttgtttttacaccgtgctaaatggaagtgga
actgtaacctgtgcagagatatcagatgattcaacaatgcttgcgctaggattttctgat
tctaacattaaaattttttcactaacaccttctaaacttagagaaataaaatcggctgat
caattaaaagatattgatcgagacgctgatgatgttttagtgagaatgatggatgatcgt
accgccgaaagtgcaagaaatttatacggtcattgtggacctgtatatcgctgtgccttt
tcgccggagaaagttttactgttatcttgttcagaagattcgactttaagactttggtgt
atgcatacatggacatgtattgtagtatataagggacacttacatccaatttgggatgta
cggtttgctccacatggtcattattttgcttcttgttcaatggataaaacagcgcgatta
tggagcacagattcacatcaacctttaagaatattcaccggacatctttcagatgttgat
tgcgttcaatttcatccaaattctaactatattgctactggttcaagcgatagaactgta
cgtttatgggactgcttatcaggacagtcagttcgtctaatgacaggacataagtctaca
atatgctgtttgtctttttcaaaatgtggaagatacttggcatcaggatcatctgataat
cgagtgttaatttgggatttatcacatggacagttagtggcccaatgcaagcatactgcg
gctttacatacaattacctttagcagagatggcactttattagcatctggtggcctagat
tgtgtgttggcgttgtgggactttttgaaattgattgaagactattctataagcagtaac
caatcatctcacaaccctgaagttttagaaggtgaatcttatttattacgctctttcagt
acaaaatcatctccatttctgaatttacattttactagaagaaatcttctcttagctgta
ggattttacaaatcctaa
DBGET
integrated database retrieval system
