Condylostylus longicornis: 129614848
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Entry
129614848 CDS
T09756
Name
(RefSeq) ATP-dependent RNA helicase DHX15 homolog
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
clon
Condylostylus longicornis
Pathway
clon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129614848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clon03041
]
129614848
03009 Ribosome biogenesis [BR:
clon03009
]
129614848
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129614848
Spliceosome [BR:
clon03041
]
Complex A
U2 snRNP components
U2 related factors
129614848
Complex B
129614848
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129614848
Ribosome biogenesis [BR:
clon03009
]
Eukaryotic type
90S particles
Helicases
129614848
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_19
nSTAND3
AAA_22
Flavi_DEAD
SRP54
ResIII
AAA_25
nSTAND_NTPase5
Cas3-like_C_2
ABC_tran
AAA_23
AAA_7
T2SSE
ATPase
TsaE
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
129614848
NCBI-ProteinID:
XP_055385767
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MSKRRIEVGETVPKKKKEELNQGASIAAALTASYVTNANMAAQKSKSINPFTKQPYSQRY
YNLFKKRITLPVFEYQADFMRLLNEHKCIVLVGETGSGKTTQIPQWCVEYALTKGKRGVA
CTQPRRVAAMSVAQRVSEEMDVILGQEVGYSIRFEDCTSAKSILKYMTDGMLLREGMSDP
MLEAYQVILLDEAHERTLATDLLMGVLKEVIKQRNDLKLVVMSATLDAGKFQQYFDNAPL
MNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRI
KREADNLGPEIGELKCIPLYSTLPPNLQQRIFEPPPPNKPNGAIGRKVVVSTNIAETSLT
IDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKA
YKHEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL
DDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVSQCFVRPNEAKKA
ADEAKMRFAHIDGDHLTLLNVYHAFKQSNEDPNWCYENFINYRSLKSADNVRTQLSRIME
RFNLKRTSTDFKSKDYYINIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPSTCLDH
KPEWVMYNEFVLTTKNYIRTVTDVKAEWLLKIAPQYYDMNNFPQCEAKRQLEMFQARLES
KQYQQGF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggcgtattgaagttggtgaaactgttccaaaaaagaaaaaggaagaattg
aatcaaggagcatcaattgcagcggcactaacagcttcatatgttactaacgcaaatatg
gcggcccaaaaatctaaatcaattaatccatttactaagcaaccatatagccagagatac
tacaatttattcaagaaaaggatcacattgccagtatttgagtatcaagcagattttatg
agattattaaatgaacataaatgtatagtattagttggtgaaactggttccggaaaaact
acacaaattccacaatggtgcgttgaatatgctttaaccaaaggtaaaaggggagtggca
tgtactcaaccaagacgagtagctgcaatgtctgttgcacaaagagtttctgaagaaatg
gacgttattttggggcaagaagttggttatagcattcgttttgaagattgtacatctgca
aaatcgatattgaagtatatgacggacggtatgttattgcgcgaaggtatgtcggatcca
atgttagaggcatatcaagtaatattattagatgaagctcacgaacgtactttagcaact
gatttattaatgggtgttctaaaagaagtaatcaaacaaagaaatgatttaaaacttgtg
gtcatgtcagctactttggatgctggtaaatttcaacaatattttgataacgcgcctctc
atgaatgtgccagggcgaacacatcctgttgaaatattttacacgcccgaaccagaaagg
gattatttggaagcagcaatacgaacggttattcaaattcatatgtgtgaggaaattgaa
ggtgatatcttaatgttcctaactggacaagaagaaattgaagaagcttgcaaaagaatt
aaacgtgaagctgataatttaggtcctgaaattggtgaattaaaatgtattccattatat
tcaactttgcctccaaatttacaacaaagaattttcgaacctccaccacctaataaacca
aatggagcgattggtagaaaagttgttgtttcaaccaatatagcagaaacgtctttaact
attgacggtgttgtgtttgtaattgatcccggttttgcaaagcaaaaggtttacaatcct
agaattcgagttgaaagtttacttgtttctcctataagtaaagcatctgcacaacaaagg
gctggtcgtgctggacgtacaaaaccaggaaagtgttttcgcttatacacagaaaaggcg
tacaaacacgaaatgcaagacaatacttatccagaaattttaagatcaaatttaggaact
gtggttttacaattaaagaaacttggaattgatgatttagtgcattttgatttcatggat
cctccagctccggagacactaatgagagctttggaattgttgaattaccttgctgctttg
gatgatgatggaaatttaaccgatttaggagctgtgatgtcagaatttccactagatcct
caacttgctaaaatgttgattgccagctgccaacacaactgctcaaatgaaattctctca
attactgcaatgttatcggtctcacagtgctttgtacgaccaaatgaagctaagaaggcg
gcagatgaggcaaagatgcgatttgcacatattgatggtgatcatttaacattattgaat
gtatatcatgcttttaaacagagtaatgaggatcccaattggtgctatgaaaatttcatc
aattatcgttctttaaaatcagccgataacgtaagaacacaactgtcccgtatcatggag
cgtttcaatttgaaacggacaagtacagatttcaaatcgaaggattattatattaatata
cgtaaagcattggtacaaggatttttcatgcaagttgctcatttagaacggactgggcat
tatttaacaataaaggataatcaaaatgttcaattacatccgtcaacttgcttagatcat
aagcccgaatgggttatgtataatgaatttgtattaaccacaaagaattatatcagaact
gtaactgatgttaaagctgaatggttattaaaaatagcgccacaatattatgatatgaat
aacttcccacaatgtgaagctaaacgtcaattggaaatgtttcaagctcggctagaatcg
aaacagtatcagcaagggttttaa
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