Condylostylus longicornis: 129614984
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Entry
129614984 CDS
T09756
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
clon
Condylostylus longicornis
Pathway
clon04382
Cornified envelope formation
clon04512
ECM-receptor interaction
clon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129614984
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129614984
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129614984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clon04147
]
129614984
00536 Glycosaminoglycan binding proteins [BR:
clon00536
]
129614984
Exosome [BR:
clon04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129614984
Glycosaminoglycan binding proteins [BR:
clon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129614984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129614984
NCBI-ProteinID:
XP_055385966
LinkDB
All DBs
Position
Unknown
AA seq
1781 aa
AA seq
DB search
MEPLLKRLLATALVLGIFYGANAQFWRDTNTGGGIDSRKYPDSYRTAQPRAPIDPSYDLL
DTVSNQRSGADPSRNCTGSDCCIPKCFAEKGNRGIPGLPGPTGSKGEQGHPGIEGPPGDK
GQKGDPGPQGPRGPKGDRGSSGVPGLPGVPGLQGYSGNPGAPGIAGKDGCNGTDGLPGLS
GIPGSPGPRGPPGIPGSKGEKGQPAVIHWDYLKGEKGEPGFTGNPGLPGPEGPEGEKGEA
GERGPYGPPGPKGDMGPKGERGLSCLAPPVPGEKGQKGEKGESRNQEESTGNTVEIKRGE
PGEKGEPGLDGPPGAKGEKGVQGPVGNDGMKGEKGLPGPSGDRGRQGGFGPPGPPGQKGD
RGDIGLRGLDGKPGAKGEPGREGKNGVPGLRGPPGPPGGGRGSPGPPGPAGPRGYRGPPG
PKGLDGYPGEPGERGPQGQKGGLGIPGTPGVEGPPGPKGDKGESGLPGLQGQPGAPGYTG
PPGPEGPRGETGEPGIGLPGPKGDDGIPAFPGLKGSKGERGYQGLPGAPGFTEAGIPGQP
GRPGRPGDKGEAGRPGIKGVKGDFGEKGDRGGRCTDCFPGLKGTKGERGNDGFPGSDGVR
GPPGERGYQGERGDDGTPGPMGPPGEKGKDGLPGLPGPDGVAGRDYPVDESLIKGQKGEK
GRLGLPGPKGVKGEAGLPGSPGFDGLKGETGLKGDKGHPGNPGIDGIIGNPGRPGIPGLK
GESIKGEPGRPGYDGTKGDRGEPGYNGEKGEPGSCSDLLKDPPKGVKGNKGDPGLKGEKG
YYGQKGVPGRTGAKGDLGLPGPPGPTGPRGLPGPRGEPGIRGQTGFPGAPGKDGIRGTPG
RPGEKGTKGEQGIALPGPPGPKGNDGPAGLKGDRGIAGEPGPAGLDGVPGYPGEKGDIGN
VGPPGFPGSVGPKGETGPVGPRGQPGPPGQPGMDGVQGRPGLKGEPGTQGLVGMPGPKGE
RGEPGIDGQKGNQGAKGVPGIRGQQGPPGFSGPKGDKGEMGPSGIDGLPGRQGLPGPIGL
PGPKGNIGPVGLPGLDGSPGLNGEKGDQGYPGLHGPKGDAGEASEKGQKGEPGPPGLRGI
DGRDGLPGTPGPKGDAGFPSHGRPGPQGQKGEPGREGRDGIPGVPGEKGDIGFAGIRGAK
GDKGNTGRAGIPGAPGLDGPPGEKGLPGQVGYPGAKGDKGEIGLQGNIGPKGEKGLAGWP
GIDGKHGEKGDRGFPGGPGRDAVAISIKGDKGETGEPGLVGLPGAIGRDGPQGLRGLDGQ
KGEIGPPGPPGLPGLDGQPGSKGDLGPIGEPGIPGVVVKGEKGLPGRPGKHGREGLMGSA
GPKGDRGVPGLQGKPGAPGMPGLQGRVGEKGDRGFQGAPGRDGNPGFAGPAGPKGEPGYP
GSKGDAGLPGLQGLKGDKGNSGIPGTSGPPGLPGLKGDIGPPGFDGVPGVPGPIGEKGFP
GPKGLDGRDGYPGQKGDKGEPGLVPPPGPKGEPGQSGYPGPKGERGPPGPPGPVGLQGER
GEKGDIGIQGLQGPPGPPGLIGTVGLSGAPGRDGLPGGPGPKGDAGLPCSQSPDYLSGIR
LVKHSQTDQVPRCDSGHIELWTGYSLLYVDGNDYAHNQDLGSPGSCLRRFSTLPILPCNQ
NNVCNYASRNDRTFWLATSAAMPMMPVNNEDIRQYISRCVVCEVPANVMAVHSQSLEIPR
CPNGWEDLWIGYSFAMHTSAGHGGGGQDLSSPGSCLEDFRATPFIECNGAKGHCHFYETL
TSFWLATIESQYQFSKPEQQTLKAGNLLQRVSRCKVCIKNS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggaacccctcttgaagcggctgctagccaccgcacttgtgctaggaattttttatggt
gccaatgcgcaattttggcgtgatacaaatacaggtggtggtatagacagtagaaagtat
ccagacagttacagaacggcacaaccaagagcccctatagatcctagttacgacttatta
gataccgtaagtaatcaaagaagtggtgcagatccctcaagaaattgcacaggctcagat
tgttgtataccaaaatgctttgcggaaaaaggcaatcgaggaatcccgggcttgccaggt
ccaactggttctaaaggtgaacaaggccatccaggcatagaaggtcctccaggtgataaa
gggcaaaaaggcgatccaggtccacaaggtccaagaggtcctaaaggcgatagaggttca
tcaggggtaccgggtctaccaggcgttccaggtctgcagggatattcaggaaaccctggc
gcgccaggtatcgcgggtaaagatggttgtaatggaactgatggattaccaggattatca
ggtattcctggaagtccaggtccacgtgggcctccaggtattcctggtagcaaaggtgaa
aaaggtcaaccagctgttatacattgggattacttaaaaggtgaaaaaggtgaaccaggt
tttactggaaatccaggattaccgggcccagaaggtcctgaaggcgaaaaaggtgaagct
ggtgagcgaggaccttatggtcctccaggtccaaaaggtgatatgggaccgaaaggtgaa
agaggtttgtcatgtttggctccacctgttccgggggagaaaggacagaaaggagaaaaa
ggagagtcaaggaatcaagaagaatctactggaaacactgttgaaataaaaagaggagaa
ccaggagaaaaaggtgaaccaggtcttgacggacctccaggtgcgaaaggtgaaaaaggc
gttcaaggtcctgtcggaaatgatggtatgaaaggcgaaaaaggtttgccaggtccctca
ggcgatcgaggtcgacaaggaggttttgggcctccaggaccacctggtcaaaagggtgat
cgcggtgatattggacttcgaggattagacggaaagccaggagctaaaggtgaaccaggc
agagagggtaaaaatggagttccaggcttgagaggtccaccaggccctccaggtggcggc
cgcggatcgccaggccccccaggtccagcaggaccgcgtggttatcgagggccgcctggt
cctaaaggtttagacggatatccaggagaacccggcgaaagaggtcctcaaggtcaaaaa
ggtggtttgggcattccaggtacacctggtgttgaaggtcctcccgggccaaagggagat
aaaggagaatctggactgccaggtcttcaaggtcaacccggagctcccggttatacgggt
ccaccgggtccagaaggacctagaggagaaacgggtgaaccaggaataggtttaccagga
cctaagggagatgatggaatcccagccttcccaggactcaaaggatctaaaggcgaacgc
ggttatcaagggctacccggtgctcccggttttactgaggccggtattcctgggcaacct
ggaagaccaggtagacctggtgataagggagaagcaggtcgacctggaatcaagggcgtg
aaaggggatttcggtgagaaaggtgatcgaggtggtcgttgcacagattgtttccctggt
ttaaaaggcacgaaaggagaacgaggaaatgacggttttccaggatctgatggtgtgaga
ggtcccccaggagaacggggttatcaaggcgaacgtggagatgacggtacaccaggtccc
atgggtccccccggtgaaaaaggaaaggacggcttacctggtttacctggtccagatgga
gttgctggtagagactaccctgttgatgaaagtctaattaagggacagaaaggtgaaaag
ggaagattgggtcttcctggcccgaaaggtgtgaaaggagaagctgggttaccgggctca
ccaggtttcgatggtttaaagggagaaacaggtttaaaaggtgataaagggcatccggga
aatccaggaatcgatggaataattggtaatcctggcagacctggtattccaggactaaag
ggcgagagtattaaaggagaaccaggacgacctggttatgacggtactaaaggagatcga
ggagaacctggatataatggtgaaaaaggtgaacctggatcatgttctgatttgttaaaa
gatcctccaaaaggagtgaaaggtaacaaaggcgatcccgggctgaaaggagaaaaagga
tattatgggcagaaaggtgtgccaggtagaaccggtgcaaaaggtgatttaggtttgcca
ggcccaccaggaccaacgggaccaagaggtttaccaggcccacgaggtgaaccaggtata
agaggacagacaggtttcccaggggcgccaggaaaggatggaataaggggaacacccgga
cgtcctggagaaaaaggtacgaaaggagaacaaggtattgctttacctggaccgccggga
ccaaaaggtaatgatggtccagccggcttgaaaggtgatcgtggtatagcaggtgaaccc
ggaccagcaggtttggatggtgttcctggatatcccggagaaaaaggagacatcggtaat
gtcggaccacccggttttcctggatctgtagggcccaaaggtgaaacgggacctgtcgga
ccaagaggccagcctgggccgccgggccaacccggtatggacggtgtccaaggtagaccc
ggtttaaagggtgagccaggcacacaaggattagtaggtatgccaggccccaaaggagaa
cgaggtgaacccggtattgacggtcaaaaaggaaatcaaggcgccaaaggagtgcccggt
attcgaggacaacaaggcccacctggtttttctggacccaaaggagataagggtgaaatg
ggcccatcagggatcgatggtttaccaggacgccaaggcctaccagggccaattggttta
ccaggaccaaaaggtaatatcggtccggtaggattaccaggtttagatggaagtccaggc
ctaaatggcgaaaaaggagatcaaggatatcctggtttacatggtcctaaaggcgatgcc
ggcgaagcttcagaaaaaggtcaaaaaggtgagcctggtccaccaggacttagaggaatt
gatggccgagatggactaccaggcacaccaggaccgaaaggtgatgcaggttttcctagc
catggaagacctggtccacaagggcaaaaaggcgaaccaggaagagaaggacgagacgga
attcctggcgttcccggtgaaaaaggtgacattggtttcgcgggaattcggggtgccaaa
ggtgataaaggaaatacaggcagagccggtattccaggtgctcctggtcttgatggccct
ccaggtgaaaaggggcttccaggtcaagtgggatatcctggtgcaaaaggtgataaggga
gaaataggattgcaaggcaacattggtccaaaaggtgaaaaaggtctagctggatggcca
ggaatcgacggaaaacatggtgaaaagggtgatcgaggcttccctggtggaccgggtcgt
gatgctgtggctatttcaataaagggcgataaaggtgaaaccggggagcctggtttggtt
ggattgcctggtgctataggacgtgatggaccacaaggcttaagaggactagatggtcaa
aaaggtgaaatcggaccacctggtcctcctggtttaccaggtttggatggtcagcccggt
tcaaaaggagatcttggaccaataggagagcctggaataccaggagttgttgttaaaggt
gaaaaaggacttccgggaagaccaggtaaacatggacgtgaaggcttaatgggatctgct
ggtccaaaaggcgatagaggagtgccaggtttgcaaggaaaacctggtgcacccggaatg
cctggtttacaaggtagagttggcgaaaaaggagatcgaggcttccaaggagcaccagga
agagatggaaacccaggatttgctggaccggctggaccaaagggcgaacccggatatcct
ggttcaaagggagatgcaggtttacctggtttgcaagggctgaaaggtgacaaaggaaat
tctggcattccaggcacaagtggtccaccgggacttcctggattaaaaggagatatagga
ccaccaggtttcgatggtgttcctggtgttcctggccctattggagaaaaaggcttccca
ggaccaaaaggtttagatggacgtgacggctatccaggacaaaaaggtgataaaggtgaa
ccaggtttagtaccaccaccaggaccaaagggagagcctggtcaatctggctatccgggg
ccaaaaggcgaaaggggtcctccgggtccacctggtcctgttggtcttcaaggtgaacgt
ggagaaaaaggagatataggcattcaaggtttgcaaggtcccccaggacctccaggctta
ataggcacggttggtctttccggagcacctggtcgcgatggtttacctggtggcccaggg
cccaagggtgatgctggcttaccatgttcacaatcaccagattatttaagtggcattaga
ttagtaaaacatagtcaaacggatcaagttcctagatgcgattctgggcacattgaacta
tggactggatattcattgttatatgttgatggaaacgattatgctcataaccaagatctt
gggtcaccgggctcatgcttacgtcgattttcaacattacctattttaccatgcaatcaa
aataatgtttgcaattatgcatcaagaaatgaccgcactttctggttagcaacatcagct
gcaatgccaatgatgccagttaataatgaagatattagacaatacatttcaagatgtgtg
gtgtgtgaggtacctgcaaatgtcatggccgtgcatagtcaatcgttagaaatcccacgt
tgccctaatggttgggaagatttatggattggatatagttttgcaatgcatacaagtgct
ggacatggaggtggtggacaagatctttcatcaccaggatcatgtttagaagattttaga
gcaacaccatttattgaatgtaatggtgccaaaggccactgccatttttatgaaacgttg
actagtttttggttagcaacaattgaaagtcaatatcaattctcaaagcctgaacaacaa
acacttaaagcgggtaatttattacaaagagtgtctagatgtaaagtttgtatcaaaaat
tcataa
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