Condylostylus longicornis: 129615015
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Entry
129615015 CDS
T09756
Name
(RefSeq) collagen alpha-3(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
clon
Condylostylus longicornis
Pathway
clon04382
Cornified envelope formation
clon04512
ECM-receptor interaction
clon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129615015
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129615015
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129615015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clon04147
]
129615015
00536 Glycosaminoglycan binding proteins [BR:
clon00536
]
129615015
Exosome [BR:
clon04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129615015
Glycosaminoglycan binding proteins [BR:
clon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129615015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129615015
NCBI-ProteinID:
XP_055386030
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MKAPGGQKTGLKSLTRTINYLWTISLVIYFVAFIELGSEFAVAQRQQPKKDCSPAQCDCK
GLKGNKGAHGPIGFPGLEGSPGDFGPPGPLGRTGEVGDFGEYGETGEKGHRGDGGEPGRP
GIPGRRGSSGEDGPQGPRGIDGCDGKDGVMGNPGYPGSPGLPGLMGKPGLQGPTGDAGEG
GINSKGVKGNRGDSGYPGADGPPGYKGYRGLKGFVGISGFPGAKGPRGDRGMRGDDAEIH
NPLIGTGEKGQKGDPADKEHVPYEKGRDAPKGQKGDSGRTGLRGNRGFPGEIGAQGLPGM
RGGAGEQGWPGERGKPGKVGEAGPSGPKGAKGAPGYSGPDGIDGRPGLTGEDGYDGTPGH
QGEAGEPGTYDPNLDERHPGPIGPQGEQGEPGEAGVAGIPGKPGRRGLIGFPGIPGNPGL
PGPPGPVGLSVKGDPGSPGEHGNMGPIGPSGRPGGIGRPGPKGFAGRNQWGPKGYPGTPG
RPGQPGHVGDRGEPGLPGQKGLPGSGFNITGKPGADGLPGYRGKPGVDGLFGLPGDKGDK
GPRGDDCGFCPPGPPGTPGDKGENGYPGIPGLRGKQGLTGPRGPKGLAGYPGKPGFKGQL
GPEGIPGDTGKPGRPGRPGRLILFGSRDEPEPGDMGDTGYRGEPGDQGVPGFVGTPGARG
QWGEKGEQGDYGTPGRPGKDGRDGSDGTDGIPGQRADAPIWSLVGNPGNPGFKGAKGESG
FNGAKGQKGEPSPSVTANAGEKGDRGEPGIRGDDGPIGEPGDDGYTGLRGDVGPQGISEA
GPEGLKGYPGVIGPQGPSGEPGAPGLNGLPGVDGLPGIKGSRGEPGPYIIPGEYGLPGNA
GIIGYPGDKGYPGRPGTRGKPGLRGRRGEKGDDGPHGIPGLPGAQGERGDYIVGRIGEPG
SPGRDGKIAPPGQQGQKGETGPRGSPGGHGAKGDTGFPGRFGIPGDIGFPGDVGFVGTPG
YPGPIGETGEIGNVGRLGRPGHMGRRGDVGPMGPKGDQGPPGSVGRAGRNGRPGKKGERG
AYGYTGPKGEKGDRAFSGMKGEMGDPGNMGPPGRNGLNGPQGSKGIEGEPGIGYEGPSGL
KGETGVPGSFGLDGLRGLKGERGATGFPGQVGEIGEPGFDGYPGLAGKNGLIGRRGESGD
PGPIGAPGMRGEPGEFGFPGSMGIKGDSGDHGIPGRPGEKGERGEIGEEGRPGQAIMQGR
YRGDKGNVGPRGLVGEPGPPGKVGPPGYTGNRGLPGSIGYAGRPGPEGFQGRKGQIGDRG
PRGLPGTLPSFINKGDEGDPGHDGLPGRPGPTGPKGAPGDYGDDGPFGLAGQPGSDGFPG
IKGITGDGGYPGIDGIPGQPGPPGLRGLPGDPGIRGPSGNPGYGIPGIRGDVGDRGHPGY
AGIDGEKGEQGMFGRPGQPGRFGPRGPRGPIGDQGWNGIEGLEGVKGLKGERGVTYPYEM
ARPGFKGDAGLPGFPGEVGEIGFIGAPGAFGYRGLKGYRGEFGIEGYMGLPGRKGEPGTT
GPPGFDGLPGIRGYKGERGDPAPPGPPPRSRGYTFTRHSQTVRIPECPANTEKLWEGYSL
AAIIGNSRAVGQDFGKAGSCLQRFTTMPFSLCGTNNVCNYAQTNEDSLWLATQEPMPMSM
TPIESRDLENYISRCVVCETRTTIMALHSQSMSLPDCPKGWDEMWAGYSYLMLTHDNSGG
FGQDLSSPGSCLEEFRTNPIIECSGHGRCNFYDPLTNFWLAVIEEHEQFIKPNQRTLKKD
HTSKISRCVVCKKRYQSRHDLPPFPEPTGLEFRRPEEEHRPQPPPPVYPRRPRPNAQRTR
RPTQRRF
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcccgggggccaaaaaactggtctcaagagtctaactcggactataaattat
ttatggacaatatcattagtaatatattttgttgctttcattgaattaggtagtgaattt
gctgttgcccaacgacaacaaccaaaaaaggattgttctcctgcacaatgtgattgtaaa
ggacttaaaggaaacaaaggagcacatgggccaattggttttccaggacttgaaggttcc
ccaggtgattttggtccaccaggacctctgggtcgtactggggaagttggagattttggt
gaatatggtgaaaccggagaaaagggtcatagaggcgatggtggcgaaccaggacgtccg
ggtattcctggaagaaggggcagttctggagaagatggacctcaaggtccacgaggtatt
gatggctgtgatggaaaagatggtgttatgggaaatcctggttaccctgggtctccaggt
cttcctggtttaatgggtaaaccagggctacaaggtcctacgggagatgctggagagggt
ggaattaattcgaaaggagtaaaaggaaatagaggtgactcaggatatcctggagccgat
ggaccacccggttacaagggctacagaggattaaaaggttttgttggtatttctggattt
ccaggtgcgaaaggacccaggggtgatcgtggtatgcggggtgatgacgccgaaattcat
aatccattaattggaactggagaaaaggggcaaaaaggagatccagccgataaagaacat
gttccttatgagaaagggcgggatgctccaaaaggtcaaaagggcgatagcggaagaact
ggtttgcgaggaaatagaggttttccaggtgaaattggtgcccaaggattacctggcatg
cgtggtggagcaggtgaacaaggttggcctggagaacgtgggaaacccggcaaagttggg
gaagccggtccaagtggacctaaaggtgctaaaggtgctccaggttattctggtcctgat
gggattgatggaagaccaggacttacaggagaagacggttatgatggtaccccggggcat
caaggtgaagcaggagaaccaggaacttatgatcccaatcttgacgaacgacatcctgga
ccaataggaccccagggtgaacaaggggagcctggtgaagctggagtggctggtatacca
ggaaaacctggacgacgcggtttaattggctttcctggaatacctggaaatcccggtctt
ccgggacccccagggccagtaggattaagcgtaaaaggtgatccaggatcgcccggagaa
catggaaacatgggccctattggtccatccggaagaccaggtgggattggtagaccagga
cctaaaggttttgctggcagaaatcaatggggtccgaaaggttatcccggtacacccgga
agaccagggcaaccaggacatgttggtgatcgaggtgagcctggtctccctggtcaaaaa
ggtttacctggaagtggtttcaacataactggaaaaccaggtgcagatggtttacccgga
tatagaggcaagcctggagttgatggtttatttggtcttcctggagacaaaggagataag
ggcccgagaggcgacgattgtggattttgtcccccaggcccaccagggactcctggcgac
aaaggcgaaaatggctatcccggaataccaggactaagaggcaagcagggcctcacaggg
ccgagagggcccaaaggtttggcaggatatcccgggaaaccaggatttaagggacaacta
gggccagaaggtattccaggtgatactggaaagccaggaagaccaggaagacctgggaga
cttatactatttggtagtagagatgagccagaaccaggtgatatgggggataccggatac
agaggagaacctggagaccaaggcgttcctggatttgttggaaccccgggcgccagaggt
caatggggagaaaaaggagagcaaggagattatggtactccaggacgcccaggaaaagat
ggacgagacggctcagatggcactgacgggataccagggcaacgagcagacgctccaata
tggagtttggttggaaaccccggaaatcctggtttcaaaggagctaaaggagaaagcgga
ttcaatggagcaaaagggcaaaaaggagaaccatctccatcagtaactgcaaatgctgga
gagaaaggcgacagaggtgaacctggaataagaggcgatgatggtccaataggagaacca
ggtgatgatggctatactggcctgagaggtgatgttggacctcaaggaataagtgaagca
ggaccagaaggtctcaaaggctatcctggtgtaattggaccccaaggacccagtggtgaa
cctggtgcgccaggactaaatggtctgccaggagtagatggtctgccggggataaaagga
tctcgtggagaacccgggccttacatcattcccggtgaatatggtttacctggtaatgcg
ggtataatagggtaccctggtgataaaggatatcctggaagacctggtacaagaggcaag
ccgggactaagaggtagacgtggcgaaaaaggagacgatgggccgcacggtattccgggt
ttaccaggtgctcaaggagaacgaggtgactatattgtaggacgaataggggaacctggt
agtccaggccgtgacggaaaaatcgctccaccaggtcaacaaggccagaaaggtgaaact
ggaccaagaggatctccaggaggacacggggccaaaggggatactgggtttccgggaaga
tttggaataccaggagacataggttttccgggcgatgtcggttttgttggtacacctggt
tatcccggtccaatcggagaaactggggaaattggtaacgttggtaggcttggtaggcct
ggtcatatgggacgtcgtggtgatgttggccctatgggcccgaaaggtgaccaaggccct
cctggttctgtaggccgagcaggaagaaatggtagaccaggtaaaaaaggtgaaagagga
gcttatggttacacaggtccaaaaggagaaaaaggtgatcgagcttttagcggaatgaag
ggtgaaatgggtgatccgggtaacatgggcccgccaggtagaaatggtttaaatggacct
caaggatcaaaaggaattgaaggagaaccaggaattggctacgaaggtcccagtggttta
aaaggtgaaacgggtgtacctggatcttttggcttagatggtctacgtggtcttaaaggt
gagcgtggagcaacaggatttccagggcaagtgggtgaaataggagaacctggttttgac
ggctatccaggtttagctggtaaaaatggcttaattggaagaaggggagagtctggcgat
ccaggaccaatcggtgcacccggaatgagaggagaacctggtgaatttggattcccgggt
tctatgggaataaaaggtgattctggagatcatggaattccaggtcggccaggagaaaaa
ggtgaaaggggcgaaataggtgaagaaggaaggccaggacaagcaataatgcaaggaaga
tatcgtggtgacaaaggtaacgttggccctcgaggtttagtgggtgaaccaggtccaccc
ggaaaagttggtccacccggatatacaggaaatagagggttaccaggaagcattggttac
gctggacgaccaggacctgagggttttcaaggacgaaaaggtcaaattggtgataggggt
ccacgtggtttaccaggaaccttaccatcatttattaacaaaggagatgaaggtgaccct
gggcacgacggtttacctggtcgaccaggaccaacaggccctaaaggtgctccaggagat
tatggagacgacggcccatttggactcgcaggacaaccaggatctgatggtttccccgga
atcaaaggcataactggtgatggcggttacccgggaatagacggtattccaggacaacca
ggcccaccaggtttaagaggtcttccaggagaccctggaattagaggaccttcaggtaat
ccgggatatggaataccgggaatacgaggagatgtcggtgacagaggacaccctggatat
gctggcatagacggtgaaaaaggagagcagggtatgtttggaagacctggtcagccggga
agatttggtcctagaggtccaagaggaccaataggtgatcaaggatggaatggtattgaa
ggtttagaaggtgtcaaaggtttaaagggagaacgaggcgtaacttatccttatgagatg
gctagacctggttttaaaggagatgcaggtttacctggttttcccggcgaagttggagaa
attggttttattggggcacctggcgcatttggctatagaggtttgaaggggtaccgcggt
gaatttggcatcgaaggatatatggggttgccaggaagaaaaggtgaacctggtacgaca
ggaccacctggctttgatggtttgcctggtataagaggttacaagggtgaaagaggtgat
ccagcgccacccggaccccctcccagaagtagaggatatacttttacacgccattcacaa
acagttcgcattcctgaatgccctgctaatactgaaaagttgtgggaaggctactcctta
gcagccattataggtaacagtcgcgctgtgggtcaagattttggaaaagctggttcatgt
ctacaaaggtttacaacaatgccattttcattgtgtggtactaacaatgtgtgtaattat
gctcaaacaaatgaagacagtttatggctagcaacacaagaaccaatgccaatgtcaatg
acacctatagaatcgagggatcttgaaaattacatttcaaggtgcgtcgtttgtgaaacc
cgaacaactataatggcattgcatagccaaagtatgagtctcccagattgcccaaaagga
tgggatgaaatgtgggctggctatagctatttaatgttaactcacgacaatagcggcggt
tttggacaagacttatcctcacctggatcatgtttagaagaattccgaacaaatccaatt
atagaatgttcaggtcatggcaggtgtaatttttatgatcctttaactaatttctggttg
gctgttattgaagagcatgagcaattcattaaaccaaatcaacgaacacttaaaaaagat
catacaagcaaaataagcagatgtgttgtttgcaagaaacgatatcaatcacgacacgat
ttaccacctttccctgagccaacgggcttggaatttagacgacctgaggaagaacatcga
ccacaaccaccaccaccagtttaccctagaagaccaaggccaaatgcacaaagaactcgg
cgaccaacacaacgtcgtttttaa
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integrated database retrieval system