Condylostylus longicornis: 129615041
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Entry
129615041 CDS
T09756
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
clon
Condylostylus longicornis
Pathway
clon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129615041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129615041
03012 Translation factors [BR:
clon03012
]
129615041
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129615041
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129615041
Translation factors [BR:
clon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129615041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
HA2_C
nSTAND3
HA2_N
AAA_22
ATPase
AAA_19
NPHP3_N
AAA_7
PhoH
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
129615041
NCBI-ProteinID:
XP_055386066
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MEDIDLSTFGSVVELMSEITIDEKDMDKVFLEFMRSLPYNQKILGSYNPIPNVILSEYLL
DNIERLLVVSETDTKLLHNNAFEKFYNEVLKSTFEDMLKIRAPMLDSDFPQGTFRNSNYK
SILNDIQIKNMLKLPVFKYTDKILDAVENNTFVLINGETGSGKTTQIPQFILDHHMNRGS
YCRIICTQPRRISAISIAERVAYERGENLGESVGYQIRLESVLPRPADSILYCTSGVLLR
MMISDPILATVSHVILDEIHERDTESDLLIGLIQLIIKYNKQIKVLVMSATFGFEEYSKN
FSNFKIINIEGTLHPVKNFYLEEILRDLNFFDFPDAGTYESRKHSNFYNTPEGRAELTRN
KEFKQMIKRYTESIEGKYPYTVLKTLENPFTEEINLDLIERLIVHVDKTMPDGAILIFLP
SFEKISNLHEMLEFTNKNEHYIIYTLHSSMPTDKQKGIFDRPPEGKRKIILATNIAETSI
TIDDIVYVINAGKAKVKYYDIKNKIETLEEYWITKANATQRQGRAGRCQPGICFNLYTKI
REENFEEYPVPTIQRTRMESVIMWLKSLKIHDVKAFLNSLISSPRNETIDDGINFLKQIN
ALDKDEVMTPLGLHLMQLPIDSQVGKMLLLSTIFGCVDPITTVAATISLKEPFSQNIKKR
KEFDDTKLEFAEHSRSDHITYSNVVKEFRSALKKKETDKFCYENFVSESIVMQIEKMKIQ
LCELLASTGFIKYPFPNHSEINQSSADLNIVRAVITAGLYPNIAFLRSIAFRNMKNSYEK
RIEHVLQTPEDGNNVKFHVTSVNRKQSEFNSKFFVYYNKHKSGNYVYLRESSMISPIAII
IFSDNVTIKSDGMEIFIYVRNNTLRFPSNKRTVNVLLQLRERFEKILEKLAMNPAYEFTG
DDKKVIEALKLLFIEENY
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatcgacttgtcaacatttggtagcgtagtcgaattaatgtcagaaataact
atagatgaaaaagatatggacaaagtttttctggagtttatgagaagtttgccttacaat
caaaaaattcttggttcttataatccaataccaaatgttattttatcagaatatttattg
gacaatatagaacgacttttagttgtatctgaaacagacacaaaacttctacacaataat
gcattcgaaaaattttataatgaagttcttaaatcgacttttgaagatatgttaaaaatt
cgagctcccatgcttgattctgattttcctcaaggcacatttcggaattccaattataaa
tcaattttaaatgacattcaaatcaaaaatatgttaaaacttccagtatttaaatacact
gataagattttggatgccgtagaaaataatacttttgtattaatcaatggtgaaacagga
tctggtaagactacacagattcctcaatttatattagatcatcatatgaatcgagggtca
tattgtcgcatcatatgtacacagccacgacgaatatcagcaatttcaatcgctgaacgg
gttgcttacgaaagaggcgagaatttaggtgaatccgttggttatcaaattcgcttagaa
agtgttcttcccagacccgctgattcgatcttgtattgcacttccggtgttttgctacga
atgatgatttcagatccaatattagcaacagtaagccacgtaatattagacgaaatacat
gaacgtgacactgaatcagatcttttaattggattgatacaactcattattaagtacaac
aagcaaataaaagttttagtaatgagtgcaaccttcggttttgaagaatattcaaagaat
ttttcaaattttaaaataataaatattgaaggcacactgcatcccgtcaaaaatttttac
ttggaagaaatactaagagacttaaacttttttgattttccggatgctgggacttatgaa
tcgagaaagcattccaatttttataatactccagaaggaagagcagaattaacaagaaat
aaagaatttaaacaaatgataaaaagatacacagaatcaattgaaggtaaatatccatat
acagttttaaaaacattggagaatccgttcactgaagaaatcaatctagacttaatagaa
cggttaatagttcatgtagacaaaacaatgccagacggcgcaatattaatatttttacca
tcatttgaaaaaatttctaatttgcatgaaatgttggaatttacaaataaaaatgaacat
tatattatatatacccttcactcgtcaatgcctaccgataagcaaaaaggaatttttgat
cggcctcctgaaggtaaaaggaagattatactagctacaaatattgctgaaacatcaatc
actattgatgacatagtatatgtgataaatgctggaaaagccaaagtaaaatattatgat
attaagaataaaattgaaactttagaagaatattggatcacaaaagcaaatgcaactcaa
cgacaagggcgagctggaagatgtcaaccaggtatatgcttcaatttatatactaaaatt
cgcgaagaaaattttgaggagtatcctgttcctacaattcaaagaactagaatggaatca
gtgataatgtggttgaaaagtttaaaaattcatgatgttaaagcattcttgaatagctta
atatcgtcgcctcgcaatgaaacaatagatgacggtataaattttcttaaacaaattaat
gcattagataaagacgaagtaatgactcctcttggcttacaccttatgcagttacctata
gattcccaagttggaaaaatgcttttattgtcaactatatttggttgtgttgatccaatt
actactgtagctgctacaattagcttaaaagaaccattttctcaaaatataaaaaagaga
aaagaatttgatgatacgaaattagagtttgctgaacattcacgaagtgatcatatcact
tattctaatgttgttaaagaattccgaagtgcgcttaaaaaaaaagaaacagataaattt
tgttatgaaaattttgtctccgaatctatagttatgcaaattgaaaaaatgaaaattcaa
ttatgtgaacttttggcatctacaggttttattaagtatccttttcctaatcattcagaa
ataaatcaatcatctgcggatttgaatattgtaagagctgtaataacagctggtttatat
ccaaatattgcctttttgaggtcaatagcctttagaaatatgaagaattcttatgaaaaa
aggattgaacatgttttacaaacaccagaagatggaaacaacgtaaaatttcatgttaca
tctgtaaatcgtaaacaaagtgaatttaattccaaattctttgtatattacaataagcat
aaatctggtaattatgtatatctgcgagagtcgtctatgatatcaccaatagcaattatt
atattttctgataatgttaccattaaatctgatggtatggaaattttcatttatgtgcga
aataacacactccgttttccttcaaataaaagaacggtaaatgtattgctacaattaagg
gaacgttttgaaaaaatattagaaaaattagctatgaatccggcatatgaatttactggc
gatgataagaaagttatcgaagctttaaaacttctttttatagaagaaaactattaa
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