Condylostylus longicornis: 129615046
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Entry
129615046 CDS
T09756
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
clon
Condylostylus longicornis
Pathway
clon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129615046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129615046
03036 Chromosome and associated proteins [BR:
clon03036
]
129615046
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129615046
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129615046
mRNA degradation factors
5'-3' decay
Decapping complex
129615046
Chromosome and associated proteins [BR:
clon03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129615046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
129615046
NCBI-ProteinID:
XP_055386070
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MSMMTENMNHLNNHGTPKSLGTNDKTVSQTAVTNDDIGWKAKLKIPPKDTRPKTSDVTDT
RGNEFEEFCLKRELLMSIFEKGWEKPSPIQEAAIPIALSGKDILARAKNGTGKTGAYCIP
VLEQIDPSKHIIQALIIVPTRELALQTSQICIELAKHLDIRVMVTTGGTNLKDDIMRIYQ
KVQLIIATPGRILDLMDKKVADMSQCKILVLDEADKLLSQDFELMLDHVIKKLAKDPQIL
LFSATFPKTVKHFKEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI
NQSIIFCNSTQRVELLAKKITELGYCCYYIHSRMAQAHRNRVFHDFRQGLCRNLVCSDLF
TRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYDDRFNLHRIEHELG
TEIKPIPKVIDPSLYVANMSAPTQSDSTSGSSENNTNSGSGKNSTSGNNGNSSNTASNSN
DLNNSSSNEEGNVSK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgatgacggaaaatatgaatcatttaaataatcatggaaccccaaaaagtttg
gggaccaacgataagactgttagccaaacggctgttaccaatgatgatatcggctggaag
gcaaaacttaaaattccaccaaaagatactagacctaagactagtgatgtgacagataca
agagggaatgaatttgaagagttttgtttaaaacgtgaattattgatgagtatttttgag
aagggttgggaaaaaccgtcgccaattcaggaagctgctattccaatagcactaagtggt
aaagatattttagctagagctaaaaatggaaccggaaaaactggtgcttattgtattccc
gtattagaacaaattgatccatcaaaacatattattcaagccttgataatagtaccaaca
agagaattagctttacaaacttcacaaatttgtatcgaattggctaaacatttagatata
agagtaatggtgacgactggtggaacaaatttaaaagatgatataatgagaatttatcaa
aaagttcaattaataatagcaacacctggccgtattttagatttaatggataaaaaagtt
gctgatatgtctcaatgtaaaattcttgtgttagatgaagctgataaattattatcacaa
gatttcgaactcatgctggaccatgttattaagaaattagcaaaagacccacaaatatta
ctattttcggcgacatttccgaaaacggtgaagcattttaaagagaaacatttacgcgaa
ccatatgaaataaacttaatggaagagttaacattaaaaggtgttacacaatattatgcg
ttcgtgcaagaacgtcaaaaagttcattgcttaaatacattattttcaaaattgcaaata
aatcaatctataatattttgtaattcaacgcaacgtgttgagttattagcaaagaaaatt
actgaattgggttactgttgctattatattcactcaaggatggcgcaagcgcacagaaat
cgagtttttcacgattttcgacaaggtctgtgcagaaatctagtctgctcggatttattt
acacgtggtattgatgtacaggctgtgaatgttgttattaattttgatttcccaagaatg
gcagaaacttatttacatcgtattggacgttctggtcgttttggtcacttaggtattgct
attaacttaattacgtatgatgatcgtttcaacttacacagaattgaacatgaattgggt
actgaaatcaaaccaattcctaaggtaattgatccatcattgtatgtcgcaaatatgtca
gcgccaacgcaatctgattcaactagtggatcatctgaaaataatacaaatagtggtagt
ggtaaaaattcaacgtctggtaataatggaaattcatctaatacagctagtaatagtaat
gatcttaacaatagttcatccaacgaagaggggaatgtaagcaagtga
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