Condylostylus longicornis: 129615330
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Entry
129615330 CDS
T09756
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
clon
Condylostylus longicornis
Pathway
clon03013
Nucleocytoplasmic transport
clon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129615330
09122 Translation
03013 Nucleocytoplasmic transport
129615330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129615330
03041 Spliceosome [BR:
clon03041
]
129615330
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129615330
Spliceosome [BR:
clon03041
]
Complex C
Other components
EJC/TREX
129615330
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129615330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
DUF2782
Motif
Other DBs
NCBI-GeneID:
129615330
NCBI-ProteinID:
XP_055386448
LinkDB
All DBs
Position
Unknown
AA seq
1526 aa
AA seq
DB search
MDSQTRSQMWKHWEKSGKSDFLKFMKSTVKSQNADLFFKSENIISGITRAIYELVWQCLL
GRLKKEAVLNALSEISHYHWDIPTIILDVINIVDAETSIVGTDGYQDERAIFCEITKDID
SFMSEKLLKERLEIDTLQDSGTVKPKVFYTKFIKIKTKLYYKQRRFNLFREESEGYAKLI
TELNQEFDEKTFGSSNAMDMIKSLIGCFNLDPNRVLDIILESFETKPENHTFFIPLLQSY
MPSGSIICEVLGYKLRNFSNSVNSTPRSLFDITALLLKYLVIKLDDIYIWLSPTDAEITA
DWEKEMLEAKEYVRKLNIISTNKDKEPVEIEPEPTDKEDKYIKNQKFGLFESLLKVGNWK
DAEKLINKLPEQCVVVHEPIAKALCELIHRSINSIYSKKCSELFAPVQSVSKKEKSLLDI
YFDFSMEAKTFNELSSYVFPMVNTLGPSLHYDPVLIYKLIRLTRTILSEMNVDHLNLPVA
NTDEEKMYYDVLNLIDSSILPALSYLDCNCCIAEEVWTVIKYFPYNLRYALYSKWKNESY
LTQPELIIRQGNTKKNIKALMKRVSKENVKPVGRLIGKLSHCSPGFLFDYILLQIQIYDN
LIGPVVDSLKYLTSLSYDVLGYCLIESLALADRDRFKDDGTSLSMWLQSLASFCGSIYKK
YNIELSGLLQYVANQLKSQRSLDLLILKEVVQKMTGIEATEEMTNEQLNAMSGGELLRGE
AGYFSQVRNTKKSSQRLKEALANNDLAVTLCLLMAQQKHCVIYRETARNHLKLVGKLYDQ
CQDTLVQFGTFLGSTYSVDEYVERLPSIIKMLQEYHIHSDVAFFLARPMFTHQINQKYDQ
LRKSDPNSKKLTTSQKMSKYLEATSAIMDPIVESVRPLHGPKVWEDISPQFLVTFWSLSM
YDLQIPHDSYQKEITKIKQLSVQALDANFSKGKKEQERYIALMEKLQDEKRKQQEHVDKI
HQRLAQEKDNWFLSRSAKAAKNETITQFLQLCLFPRCTFTALDAIYCAKFVHTIHTLKAA
NFSTLLCYDRIFCDITYSVTSCTENEATRYGRFLCAMLETVMKWHSDQNVFNKECASFPG
FVTKFRVSNQFSEANDQVGYENYRHVCHKWHYKITKAIVVCLDSKDYMQIRNALIILMRI
LPHFPVLTKLSQIIERKVEKVREEEKNQRPDLFVLASSYIGQLKTRAANMIKESDFHQVS
EKPQRDTIVVQDIKPVAPTSSLNGEIKLDKREKDKGDKKIIKNSINNDKDIKLINLTEIL
DKDIKKEVKDTKKEKEEKIKETKIKDDKDDDIRRKEKERRKEYRLNDSPIFVDAPHTNDY
YFIDKEHDLRVEREREREKEKDRERERDRDLSSVSNSSNGSLQRRSQEHQDFEKETKRRK
VESQAGSSSNTSSLKKIQQQQQLQQQPQHHQNDPEIYEIKKERSSKTKDRKEKSMDDEKE
LLRKERKLGRKRERLEENSSNEHKRRRGTEANPNGADDESSRGDKYHSREKSPHGSREAK
DRSSHDKFEREKSYTLTKSTRSRVAY
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggatagccaaactcgaagtcaaatgtggaaacattgggaaaaaagtggaaaatccgat
ttcttaaaattcatgaaatccactgttaaaagtcaaaatgcagatctgttttttaagagt
gaaaatattatttcaggcattacaagagctatttacgaattggtttggcagtgtctttta
gggcgtttaaaaaaggaagcggtgcttaacgctttatcagaaatatcacactatcactgg
gatataccaacaataattttagatgtaattaatatcgttgatgcagaaacctcaattgtt
ggaactgatggatatcaagatgaacgtgctatattttgcgaaattacaaaggatattgac
agttttatgtctgaaaaactactaaaagaacgattggaaattgacacattgcaagattct
ggtacagtcaaaccgaaagtgttttacacaaaattcattaagataaaaacaaaattatat
tacaagcaacgtagatttaatttatttagagaagaaagtgaaggctatgccaaactgata
actgagttaaatcaagaatttgacgaaaaaacttttggatcttctaatgctatggatatg
ataaaatctttgattggttgctttaatcttgaccctaatcgcgtactggatattatatta
gagtctttcgaaacgaaacctgaaaaccatacattttttattccactgttacagtcctac
atgccaagtggttcaataatttgtgaagttctaggatataagctgagaaatttttcaaat
tcggttaactcaactccaagatcgttatttgatattactgcattacttcttaaatacttg
gttattaaattggatgatatttacatatggcttagcccgactgacgctgaaataactgcg
gattgggaaaaagaaatgctagaagctaaagaatatgttcgaaaattaaacattatttca
actaataaagacaaggaacctgtagaaattgaaccggagccaacagataaggaagataaa
tatataaaaaatcaaaaatttggattatttgaatcacttttgaaagtaggaaattggaag
gatgcggaaaaattgattaataaattaccagaacaatgtgttgttgttcatgaaccaatt
gcaaaggcattatgtgagttaattcacagatcaatcaacagtatatattcaaaaaaatgt
tctgaattatttgcacctgttcaatctgtaagcaaaaaggaaaaaagtttgttagacatc
tattttgacttttctatggaagctaaaacatttaacgagctaagcagctatgtatttcca
atggttaatacattaggaccatcattgcattatgatcctgtactaatatacaaactaata
agattaacgaggacaatattatctgaaatgaatgtggatcacttaaatttacctgttgca
aatactgatgaagagaaaatgtattatgatgtcttaaatcttattgattcatcaatttta
ccagctttatcttatttagactgcaattgttgtattgctgaagaagtatggacggttata
aagtattttccatacaatttaagatatgcactttactcgaaatggaaaaatgaatcttat
ttaacacaacctgaacttataatacgacagggaaatactaagaaaaatataaaagcgctg
atgaaacgagttagtaaagaaaatgtaaaaccggtggggcgcttaattgggaaactaagc
cattgctctcctggatttttgtttgattatattttattacaaatacagatttatgataat
ttaattggaccagtagttgattcactaaaatatttaacatctctttcgtatgatgtgtta
ggttattgtttaattgaatcactagctttagctgatagggatcgctttaaagacgatggt
acatcactatcaatgtggttacagagcttagctagtttttgtggatcaatttacaaaaaa
tataatatagaattaagcggtttattacagtatgttgcaaatcaattaaaatcccaacgt
agcttagatttattaatacttaaagaagttgtacagaagatgacagggattgaagctaca
gaagaaatgacaaatgaacaattgaacgcaatgagcggtggtgaattattacgaggtgaa
gcgggatattttagtcaagtccgaaacacaaagaaatcttcacaaagattgaaagaagcg
ttagctaataatgatttggcagtaaccttatgtttgttaatggctcaacaaaaacactgt
gttatatatcgtgagacagctagaaatcatttaaaattggttggaaaactttatgatcaa
tgccaagatacgttagttcaatttggtacattcctagggtcaacttattctgtagacgag
tatgtcgaacgtctaccctcaatcataaaaatgttgcaagaatatcatatacactccgat
gttgcattttttttagcgagaccaatgtttacccaccaaattaatcaaaagtatgatcaa
ttacgaaagtctgaccctaattcaaagaagttaacaacatctcaaaaaatgtccaaatat
ttggaagccacgtctgccataatggatcctattgtagagtcagtaaggccattacacggc
cctaaagtttgggaagacataagtccgcaattcttggttactttttggtctttgagtatg
tatgatcttcaaataccgcatgacagctatcaaaaagaaataaccaaaataaaacaactt
tctgtacaagccttagacgcaaatttttctaaaggcaaaaaggagcaagaacgttatata
gctttgatggagaaacttcaagatgaaaaacgaaagcaacaagaacatgttgacaaaata
catcaaaggcttgctcaagaaaaagacaactggtttttatcccgctcagctaaagctgca
aaaaatgaaaccataactcaatttcttcagttatgcttgtttccacgttgtacatttacc
gctcttgatgcaatttattgcgcaaaatttgttcatacaattcatactttgaaagccgct
aacttttcgactcttttatgttatgacagaatattttgtgatataacgtattctgtaaca
tcatgtactgaaaatgaagcaaccagatatggtagatttttatgtgcaatgctagaaact
gttatgaaatggcattcggatcaaaatgttttcaacaaggagtgtgcaagttttcccgga
ttcgtaacgaagttccgtgtaagcaaccaattttctgaagcaaatgatcaagtgggttat
gagaattacagacatgtttgccataaatggcattataaaattactaaagctattgttgta
tgtttagattctaaagattatatgcaaattcgtaatgctttaataattttaatgagaatt
ctacctcattttccagttttgactaagctttctcaaataatagaaagaaaagtagaaaaa
gttagagaggaagaaaaaaatcaaaggcccgacttattcgttttagcatcaagttatatt
ggtcaacttaaaacgagggctgccaatatgatcaaagaaagcgacttccaccaggtatcc
gaaaaaccccaaagagatacgatagtggtacaagatataaagccagtcgctccaacaagc
tccttaaacggtgaaataaaattagataaacgtgaaaaagataaaggtgacaaaaaaata
atcaaaaactctataaataatgacaaagatataaaattgataaacttgactgaaatcctc
gataaagatataaaaaaagaagttaaagacacaaaaaaagaaaaagaagaaaaaattaaa
gaaacaaaaattaaggacgataaagatgatgatataaggcgaaaagaaaaggaaagaagg
aaggaatatcgcttaaatgattcaccaatttttgttgatgcgccccatacaaatgactat
tattttattgacaaagaacatgatcttcgtgttgaacgagagcgtgaaagggaaaaagaa
aaggacagagaaagagaaagggatcgagacttaagttcagtatcaaattctagtaatggg
tctcttcaaagaagaagtcaagagcatcaagattttgaaaaagaaacaaaaagacgtaag
gttgaaagtcaagctggaagtagtagcaatacttcaagtttaaagaaaattcaacaacaa
cagcaactgcaacaacaaccacagcaccatcagaatgatcctgaaatttatgaaataaaa
aaagaaagaagttccaaaacaaaagatcgcaaagaaaaaagcatggatgatgagaaggaa
ttattacgcaaagagagaaagcttggaagaaaacgagaaagattagaagaaaattcttca
aatgagcataaaagaaggcgtggtactgaagcgaatccaaatggtgctgatgatgagtcc
agtagaggagataagtatcattcaagagagaaatcaccgcatggtagtagagaagcaaaa
gatagatcctcacatgataagtttgaacgagaaaaatcatatactttgaccaaatctaca
aggtcaagggtagcatattaa
DBGET
integrated database retrieval system
