Condylostylus longicornis: 129615564
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Entry
129615564 CDS
T09756
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
clon
Condylostylus longicornis
Pathway
clon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129615564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129615564
03012 Translation factors [BR:
clon03012
]
129615564
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129615564
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129615564
Translation factors [BR:
clon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129615564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_19
ResIII
NB-ARC
NPHP3_N
AAA_22
EntA_Immun
AAA_11
TsaE
Motif
Other DBs
NCBI-GeneID:
129615564
NCBI-ProteinID:
XP_055386793
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MKSATKRNCDDSRSPPSHLRGRELGLYYKQLSKEKRADETSKKVVGGRIILPDEFIQQIE
DQLNAIEQENLCKKINLNFETYFNEIINSSFQECLKEKSQELKELVPFGTFSPQDHVDRT
LTEMHLKLPVFNYSEQILKSLSENTFVLISGDTGCGKTTQIPQIILDDYIKRGYGSYCNI
ICTQPRRISAISVAERVAFERSEKLGKSVGYQIRLENRFPRSCASILYCTTGVLLRRLET
DPLLSNVSHVILDEIHERNIESDILIGLLKQITKYNKKLKVVLMSATFGIEDFAKHFNDS
NIIQIEGTLFPVKVNYLEDVLEEIKFFKFPNPKSFLKDKPKYVKHLKSTKNQLKKQSDFE
DFINPYARNLRGEYSPEVIKAIQNPTSEEINLDMLKALVFYIDSKKDPGAILIFFPGYEK
ISKFHEILRTSQRRSHMLIYPLHSMMPTLEQKGVFEKPPDGMRKIILATNIAETSITIDD
IVYVINTGKVKYKDYNISRNYSTLQEHWVTIAHSKQRQGRAGRCQPGICYNLYTKAREYT
LEEYPLPEILRSRLEPVILNLKMLRIHDVKEFMSTLISCPQEASIDNGIKLLKRLNALDE
NENITPLGLHLAKLPLDPQIGKMILMAAIFQCIDPITSAAATLSFKDPFYRPIGKESEVD
RAKNKFSESSQSDHLTYGNVISEFRKHRNNSTFLYDNFLAFSTLNQLEHMKTQLCELLHS
AGFINHSDPRNEISNANSSRDHLLRAIIAGGLYPNVAVIRKVKQLKNRVTPVMHIETPED
GVKVKIHPSSVNSKERSFDSKFLVFFNIQKSTDVFLHDTTMVYPISLLIFGDQVAIKRDG
VDDKKWYINMANNSYQFESNEKTAKIILKLRNRFDVLLRDLALNPTVISDDKGRDRNLID
AMVMILAYESGSEDNYEYR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgcaacaaaacgtaattgtgatgattcgcgtagtcctccatcacatttaagg
ggacgtgaacttggtttatattataaacaattgtccaaggaaaagagggccgacgaaaca
agcaagaaggttgttggaggacgtataatattaccagatgaatttattcagcaaatagag
gatcaactaaatgcaattgaacaagaaaatttatgcaaaaaaattaatttaaattttgaa
acatattttaatgaaattattaattcttcattccaagaatgtttgaaagaaaaaagtcaa
gagcttaaggaattagtgccatttggaactttttcaccccaggatcatgttgatagaact
ttgacggaaatgcatttaaaattaccagtatttaattattcagaacagattttaaaatct
ttatcagaaaacacatttgttttaataagtggcgatactggttgtggaaaaacaacccag
ataccacaaataattttagatgattatattaagcgtggttacgggtcttattgcaatatt
atatgtacacagcctcgtcgaatatctgctataagtgtcgccgaacgagtagcatttgag
cgttctgaaaaattgggtaaaagtgttggttaccaaattcgtttggaaaatcgttttcca
cgttcttgtgcatcaatactctactgtacgacgggagttttattgcgccgccttgaaaca
gacccattgttatcgaatgtttctcatgtaattttggatgaaatccatgaaagaaacatt
gaatcagatatattaattgggctattgaaacaaataacaaagtataataaaaaacttaag
gtagttttaatgagtgcgacttttggaatagaagatttcgcaaaacattttaatgatagt
aatataatccaaatagaaggaactttgttccctgttaaagtaaattatctagaagatgtt
cttgaagaaataaaatttttcaaatttcctaatcctaaatcatttttgaaagataaacct
aaatacgtaaagcatttgaaaagcacaaaaaatcaacttaaaaaacaatcagattttgaa
gattttatcaatccatacgctcgaaatttgagaggagagtactctccagaagttattaaa
gctatacaaaatcctacttcagaagagattaatttagatatgctcaaagcgctggttttt
tacatcgatagcaaaaaggaccctggtgcaattctaattttttttcctggatatgaaaag
atatcaaaatttcatgaaattttaagaacttcccaaagacgtagtcatatgttgatatat
ccattacattctatgatgccaacattagaacaaaagggtgtgtttgaaaagccaccagac
ggaatgcgaaaaataatattggcgacaaatatagcagaaacttctatcaccattgatgat
atagtatatgttattaacacgggaaaagtaaaatataaagattacaatatatcccgaaat
tattcaactcttcaagaacactgggttacaattgctcattcaaaacaaaggcaaggtaga
gccggtagatgtcaacctggtatatgttataatctttatacaaaagcaagagagtacact
ttggaagaatatccgctaccagaaattttacgatcccgattagaacccgttattttaaat
ttgaaaatgttaagaattcacgatgttaaagaatttatgtcaactctgattagttgccca
caagaagcttctattgacaatggtataaaactgctgaaacggctaaatgcacttgatgaa
aatgaaaatattacaccattgggattacatttagcgaaattgcctcttgatcctcaaatt
ggtaaaatgattttaatggccgccattttccagtgcattgatcctattacgtctgctgca
gcaacattgtcctttaaagatccattttacagaccaatcggcaaagaatctgaagttgac
agagctaagaataaattttctgagtcatcccaaagtgatcatttaacttatggcaacgtt
attagtgaatttagaaaacacagaaacaattcaacatttttatatgacaattttttagca
ttttcaacattaaatcaattagaacatatgaaaacccaactttgtgaactccttcattct
gcgggttttataaatcattcagatccacgaaatgaaatttcaaatgcaaactcttccaga
gatcatttgttgagagcaattattgctggtggcctttatccaaacgtcgctgtgataaga
aaagtaaagcagttaaagaatcgtgttactcctgtcatgcatattgagactcctgaagat
ggtgttaaagtcaaaatccatccatcatcagtgaattcaaaagaaagaagtttcgactcg
aaatttttggtattttttaatatacaaaaatctacagatgtttttttgcatgatacaaca
atggtatatccaatatccctattgatttttggagatcaagtcgcaataaaaagagacggt
gtggatgataaaaagtggtatattaatatggccaataattcttatcaatttgagagtaat
gagaaaacagctaaaattattttaaaactgcgtaatcgttttgatgtgcttttgagagat
ttggctttaaaccctactgttataagtgacgataaaggaagagatagaaatttaattgat
gctatggttatgattttagcatatgaaagtggcagtgaagacaactacgagtatagatag
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