Condylostylus longicornis: 129615704
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Entry
129615704 CDS
T09756
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
clon
Condylostylus longicornis
Pathway
clon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129615704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129615704
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129615704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_8
TPR_16
TPR_1
TPR_14
TPR_17
TPR_6
TPR_11
ANAPC3
TPR_CcmH_CycH
ARM_TT21_C
TPR_Slam
Fis1_TPR_N
DUF4919
ANIS5_cation-bd
DUF7017
Motif
Other DBs
NCBI-GeneID:
129615704
NCBI-ProteinID:
XP_055387036
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MSKEVKAALKEIREAIKNKDNTAAIKKCEELLKNDPKNYMGLVLMGAAYQESDKKTAAKY
LKQAVECVKDTDALLALQGLANCADAEDLPNIYQKLIRLVPTKYEDYHEKLVALSNQNNF
NECCNVFQQELQNDSEISVKQKDSAFRSLGKIIAKVEKIPENFDPNLIILALENVLNAEC
GSIIELSCCKVYFKMLYNKSNNFDKLLKKAEEIVKKYPNELFPLEWICLIYKTQHQKNNI
DELLEQPIDHYINKLLTINQNSILAITVKAQLYYKNHQYVEAKNLLVQIVDHDPRLIKEL
LADIYMKIGVYCLAENILSQLNLKNLKYGICLCNSDDLDSVNEGILLLEDKTQFNRNDEL
LYALGKAYFKTKNEIKLQNIFEEIKQLENEELLKIFEFDFCTTTEKKLDILNMKTDSSFE
IDLRKGKLYIELKQYKDALPFLLKATKMKPYFADCYLYLGILYNSIKDVMHAKKCFRKCS
DLNPCCELAISNLSAIYRSEGEWELNANFLDSVVKQLDGTKLKWVLFQQSLNYLDMEQYE
KAIQSLRVAMKYDQTNILYWEILAEVYHERGSYNSAMKVFQKILEQNPDHKYAKLQVATI
KCTMGLYNESIEDFSELLLVDDQYLPAIKGIAEAHYQLANHLLHENLFGRCKSNLQIAID
HLQKIFLNHKNKNFLWLWRLTANIFTAVACLPSKLSFLKIYGILARREEEDVCELNRKDL
FELALKFYSGALKLTQDDTFLWQDLSLCAYFYILFEENSDKPKLMQLAQNACKSSIKCSP
KRWQTWNLLGVLCATKLDDLEPNYSLAQHYFIKGLQLDENCAIIWANLGVLLLNVNDISL
SNKYFKRSQESNPIYINGWLGQAIIAELIGEEEEAIDLFRHCTELDFHIESALGYSHWIC
KILSKQKCLSKSLYDLFINKLHAISHAMDCISWYTRLLDDKSSIESLSYYGYLFSNQKLW
SSAIKAYELAVEKAEGEQKDIILFNLGYCYLNSGKTKLAASCFSSLSEASVKSTIGYALS
LFQSEDALKSYEVYQCALEWLASKDEEKAQILISMSAIVYSLQGEKDAKSILYQCLDLEP
RPIKAMFSACALGIIHGDLQFAESIINELKKFENDMEYCHHIAFLTSQYYYAKRQSKQAY
YYLISKVHTYPDRPLLRKVLADFAINYLSKTKKYSKGTCQIAQSVVILGHKASERNDSLE
TAKALLTASEAMKNVDKIRQKKLIQQSIHMHPSFKLAWNALVSVKA
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaagttaaagcggcacttaaagaaataagagaagccattaaaaataaagat
aatacggctgcaataaaaaaatgtgaggagctccttaaaaatgatcctaaaaactacatg
ggcttagttctgatgggtgcggcatatcaagaaagcgacaaaaaaactgctgcaaaatac
cttaaacaagctgttgaatgtgtaaaagatacagatgcgttacttgccctgcaagggtta
gctaattgtgcagatgcagaagatttaccaaatatatatcaaaaattaataagattggtc
ccgacgaagtacgaagattatcatgagaaattagtagctctttctaaccaaaacaatttt
aacgaatgttgcaatgtttttcaacaagagctccaaaatgattcagaaatttctgttaaa
caaaaagattctgcttttaggtcgttaggaaaaattattgcgaaagtggaaaaaattcct
gagaattttgatccaaacttgataattttagctttagagaacgtattaaatgccgaatgc
ggatcaattattgaattaagttgttgtaaagtatattttaaaatgctttataataaaagt
aataattttgacaaacttcttaaaaaagccgaggagatagtaaagaaatatccaaacgaa
ttgtttcctttagaatggatttgtttaatatataaaacacaacatcaaaaaaataatata
gatgaactactagagcaacctattgatcactacataaataaactcttgacaatcaatcag
aattcaatcttagctattactgtaaaggcacaactatattataaaaatcatcaatatgtt
gaagctaaaaatcttttggttcaaattgtcgatcatgatccacgtttaattaaagaactt
ttagccgatatatatatgaaaattggtgtttattgtttagcggaaaatatattaagccaa
ttaaatctcaaaaatttaaaatatggaatctgtctgtgtaattccgatgatttagattca
gttaatgaaggaattttgcttttggaagataaaactcaattcaatagaaacgatgagctt
ttatacgcattaggaaaagcatatttcaaaacaaaaaacgaaataaaacttcaaaatatt
ttcgaagagataaagcaactagaaaatgaagagttattaaaaatctttgaatttgatttt
tgcacaacaactgaaaagaaacttgatattttgaatatgaaaacagattcttcatttgaa
atagatttgagaaaaggaaaattatatattgaactaaaacaatataaagatgcgttaccg
tttcttttaaaagccacaaaaatgaaaccgtattttgcagattgctacctctacttggga
atattatataatagtattaaagacgttatgcatgccaaaaaatgtttcagaaaatgtagt
gatttaaatccctgctgcgaattggctattagtaatttgagcgctatttatagaagtgag
ggagaatgggaacttaatgcaaatttcttagatagtgtcgtaaaacaattggacggtacc
aaattaaagtgggttctttttcaacaaagtcttaactatttagatatggaacagtatgaa
aaagcaatacagtctttaagagtagctatgaaatatgatcaaacaaatatattatattgg
gaaattttggcggaagtctatcacgagaggggttcatacaactccgctatgaaagttttt
cagaaaatattagaacaaaaccccgatcataaatatgcaaaacttcaagtggcaactata
aaatgtacaatgggtctgtacaatgagtcaattgaagatttcagcgagctgttattagtg
gatgatcaatacctacctgcaatcaaggggattgccgaagcacattatcaattagcaaac
catttattacacgaaaatttgtttggcagatgtaaaagtaatttacaaatagcaatagat
cacttacaaaaaatatttttaaatcacaaaaataaaaactttttgtggttgtggcgcctt
actgccaatatttttaccgcagtagcatgtttgccatcaaaattatcatttttaaaaatt
tatggaattcttgcaagacgcgaagaagaagacgtttgtgaacttaaccggaaagattta
tttgaactagctttaaaattttatagcggagcgctaaaactcactcaggatgatactttt
ttgtggcaagacttatccctttgtgcgtatttttacattttgtttgaagaaaattcagat
aaaccaaaattaatgcaactagcgcaaaatgcttgtaaatcgtctattaaatgttccccg
aaaaggtggcaaacatggaatttacttggtgtgctctgtgcaacaaagttagatgattta
gaaccaaattattctttagcacagcattattttattaaaggacttcaattggatgaaaat
tgtgctataatatgggcaaatttaggagtattattattaaacgtaaatgatatttcttta
tccaataaatatttcaaacgatcgcaagaatccaatccaatatatattaatggttggcta
ggacaagcaataattgccgaactcattggtgaggaggaagaagcaatagatttatttaga
cattgcactgagttagattttcatattgaatcagcgttgggttactctcattggatctgt
aaaattttgtctaaacaaaaatgtctttcgaaatcgttatatgatttatttataaataaa
ttgcatgctatttcgcatgcaatggattgcattagctggtatacaagacttctagatgac
aaatcatcaattgaatctttgtcttactatggttatcttttctctaatcaaaagttatgg
tcctctgctatcaaggcatacgaattggctgttgaaaaagctgagggcgaacaaaaagat
atcatactttttaatttaggttactgttatttaaactctggtaaaacaaaacttgctgct
agctgttttagtagtttgtcagaagcgtccgtaaaatcaacaattggttatgcgctatca
ctctttcagagtgaagatgctcttaaaagttatgaagtatatcaatgtgccctagaatgg
ttggcttcgaaagatgaagagaaggcacaaattttgatttcaatgtcagcaatagtttat
tcacttcaaggtgaaaaagacgctaaatctattctttatcaatgtcttgatctggagcca
cgacccataaaagctatgttttctgcttgtgcacttggtataatacacggagatttacag
tttgctgaatctattataaatgaactcaaaaaatttgaaaatgatatggaatattgccat
catatcgcttttctgacatcacaatattattatgctaagagacaatccaaacaagcttac
tactatttaatatcaaaagtacatacttatcccgatcgacctttattaagaaaagttttg
gctgattttgcgataaactatttatcaaaaacaaaaaagtattccaaaggaacttgtcaa
attgcccagagtgtggttattttgggacataaagcttcagaaagaaatgattcactggaa
actgcgaaggcgttgctaaccgcaagtgaagctatgaaaaatgttgataagataaggcag
aaaaaacttattcaacaatcaattcatatgcacccaagcttcaaattagcatggaatgcc
ctagtatctgtgaaagcgtaa
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