Condylostylus longicornis: 129615841
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Entry
129615841 CDS
T09756
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
clon
Condylostylus longicornis
Pathway
clon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129615841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129615841
03009 Ribosome biogenesis [BR:
clon03009
]
129615841
03036 Chromosome and associated proteins [BR:
clon03036
]
129615841
Enzymes [BR:
clon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
129615841
Messenger RNA biogenesis [BR:
clon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
129615841
Ribosome biogenesis [BR:
clon03009
]
Eukaryotic type
90S particles
RNase
129615841
Prokaryotic type
rRNA processing factors
129615841
Chromosome and associated proteins [BR:
clon03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
129615841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
AAA_12
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
129615841
NCBI-ProteinID:
XP_055387198
LinkDB
All DBs
Position
Unknown
AA seq
1331 aa
AA seq
DB search
MNFFPHGHSSYNKLNSVSCCAKESDTPQQYSYSIPPRMPSNFNKVSSTNDMQYQTDYGCN
YSYQAIYRSNYSVPQLGRSTYTSCEANRGSTYIPTVFDRPPPPIHCLPGDFSQPPPPSGH
ASYPGSLGFVPPFPPPSIEVAEIIPNMSTLACENFIPIAKKSEKEISWNPSLTGSSARKI
CQQSARVQSKDRKSLLHVNSRRNKNEKEEESERERLLKSWRSQYCATSECLSKKLIELSS
EDCDKEVWIRSSPAEIYYKKNTNEVESTPKCDILCQLFENELVDRTQRIRSTLEPYSPPP
RKRVHKVCKHKSEKCSSESSDEDFEPEEDCSMEELSRKIQHKYRLHRDLWHNEPGEMNDG
PLCRCSAKSRKVGIRHGIYPGETGFPKCKLNSNNASKLHHYRITISPPTNFLSKTPTIIK
HDQHEFLFEGFSLLSHAPIGELPVCKVIRFNIEYTILYIEEKIPDNFTIRELDSFFQYLF
HELLELVDFNLKPSKNSEESCSMYHFIPRFVRDLEDNGKEVLSMIEVLRYLLDSSRPLVD
LSHLQRMNSIPQHEWQDYVDYVKGMVVTNPTKRPSSVRVDQLDRNVSDLPETDEIKEVNG
LFHPAIVHFGIRPPQLSYAGNPEYQKAWREYVKYRHLIANMSKPSYEDKRKLELKEHKLQ
EMRTQGRMMRNITVAVSSKGFYRTGIMCDIVQHAMLIPVLTGHLRFHQSLNLLENAIEYK
FNNRYLLQLALTHPSFKEIFGTNPDHARNSLTNCGIRQPEYGDRKIHYMNTRKRGINTLI
NIMSRFGKECETDSNITHNERLEFLGDAVVEFLSSIHLFFMFPDLEEGGLATYRAAIVQN
QHLAVLAKKLHLEEYMLYAHGSDLCHELELRHAMANCFEALMGALLLDGGITVADQVFSN
ALYKGDPLKDIWENYPPHPLQQQEPLGDRHWIQSSQLLKDLTQFEESIGIRFKNIRLLAR
AFTDRSIGFTLLTLGSNQRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNRT
QAVVCDDLGMTKYAVYSNPKADLKTKDRADLLEAFLGALYVDKGLEYCEIFCQVCLFPRL
QVFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPIYKVIDSIGPTNTRIYTVAVYFRGKR
LAKATGHSIQQAEMNAAKTALENSRELFPQLDHQKRVITKSINRQKGKFSNEEVTGEMKL
EENELKRGSYFPVDDSHLPKQYRMQEDISSDELEISDEETLIENKLKKKPRKRKKKKRKQ
ATTPEKSFAKMHFTTFSDIKENVAKSSKNRSNLKQKLAYHSISYENIFEVLNDSLENISS
STEMESGEITS
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttttccacatggtcactcttcatataataaattaaattcagtttcatgttgc
gctaaggaatcagatacacctcagcaatattcctactctatacccccacgtatgcccagt
aactttaataaagtatcatcaacgaatgacatgcaatatcaaaccgattatggatgtaac
tatagttaccaagcaatatatcgatctaactatagcgtaccgcagttgggaagaagtaca
tacaccagttgtgaagctaatcgtggttcaacatatattcctacagtatttgatagacca
cctccccctattcattgcctaccaggcgatttttctcaacccccgccaccatctggacat
gcgtcataccctggttctttaggttttgttcccccatttccacccccttcaattgaagta
gcagaaattattccaaatatgagtactttagcgtgtgagaatttcattcccattgcaaaa
aaaagtgaaaaggaaatcagttggaatccgtctttaactggatcttcagcgcgaaaaatt
tgccagcaaagcgctcgcgtacaatcaaaagatcgaaaaagtttacttcacgtcaattca
cggcgtaacaaaaatgaaaaggaagaagaaagtgaaagagaacgattgttaaaaagttgg
agaagtcaatattgtgcaacttcagagtgtttatcaaaaaaattaattgagctttcgagt
gaagattgtgataaagaggtttggattcgatcttctcctgctgaaatatattataaaaaa
aatactaatgaagtcgagtcgacaccaaaatgtgatattttatgtcaactttttgaaaat
gagttagtcgatagaacacaacgaattcggtcaactttggaaccatatagcccaccacct
cgaaaacgagttcacaaagtatgcaaacataaatcggaaaaatgctcatcggaatcgtct
gatgaagattttgaaccagaagaggattgctcgatggaggagctgtcacgaaaaatccaa
cataagtatcgcttgcaccgtgatttatggcataatgagccaggagagatgaatgacgga
ccattatgtcgttgctcagctaaatctcgcaaggttggtataaggcatggaatatatccg
ggagaaacagggttcccaaaatgcaaacttaactccaataatgccagtaaattgcatcat
tatcgaataactatttcaccccctacaaattttctaagtaaaactccaactataataaaa
catgatcaacatgaatttttatttgaaggattttcgcttctatcgcacgctcccataggt
gagttgcctgtatgcaaagttattcgttttaatatcgaatacacgattttatatatcgaa
gaaaaaatacctgataattttactataagagaacttgattcattctttcagtatcttttt
catgagctcctcgaacttgtagattttaatttgaagccttccaaaaattcagaagaaagt
tgttcaatgtatcattttattccacgttttgttcgtgatttggaagataatggaaaggag
gtattgtcaatgattgaagttttgcgttatttgttagattcctcaagaccattagtagat
ttaagccatttgcaacgtatgaatagcattccccaacatgagtggcaagattatgtagat
tatgttaaaggaatggtggtcaccaatccaactaagaggccatcctctgttcgagttgat
caactggacagaaatgtatctgatttaccagaaactgatgaaataaaagaagtaaatggg
ctattccacccagccattgtccactttgggataagaccacctcaattaagttatgctggc
aatccagaatatcaaaaagcttggagggaatatgttaaatatcggcatttgatagcaaat
atgtcaaaaccctcttatgaagacaaaagaaaactagaattaaaggaacataaattgcaa
gaaatgcgtactcaaggtcgaatgatgcgcaacataactgttgctgtaagttcaaaagga
ttttatcgtactggaattatgtgcgatatagtacaacatgcgatgcttattccagttttg
actggacatcttcggtttcatcaatcattgaatttacttgaaaatgctatagaatataaa
tttaacaatcgatatcttttacaattagcattaacccatccatcatttaaagaaattttt
ggaacaaatcctgatcacgctcgaaatagtttaacaaattgtggcataagacaaccagag
tatggcgatcgtaagattcattatatgaacaccagaaaaagaggtataaatacattaatt
aacataatgtcacgatttggcaaagaatgtgagactgatagcaacatcacacataatgaa
cgtcttgaatttttgggtgacgcagtggttgaatttttaagctctatacatttatttttt
atgtttcctgacttagaagaaggtggactagctacatacagagctgctatagttcaaaat
caacatttggctgtattagcaaagaaattgcatttagaagaatatatgctatacgcccat
ggctctgatttgtgtcatgaattggagttaagacatgccatggcaaattgttttgaggcg
ctaatgggcgctcttttattagatggaggaataacagttgctgatcaagttttttcgaac
gcattatataaaggtgatcctcttaaagatatttgggaaaattatccaccacatccttta
caacaacaggaaccgttaggggatagacattggatacaatcttctcaattacttaaggat
ttaacccagtttgaagaatccattggcattcgatttaaaaatatcagattacttgccaga
gcatttactgacaggagtattggatttactctacttacacttggttcaaatcaacgacta
gaatttcttggtgatacggttttgcaattaatatgttcagaatatttatacagacacttt
ccggaacatcatgaaggacatctatctctacttcggtcatctttggtcaataaccgaacc
caagccgtagtgtgtgatgatttgggtatgacaaagtatgcagtttattccaatcctaag
gcagatttaaaaactaaagatcgagctgatttgcttgaagcttttttaggtgctttatat
gtagataaaggattagaatactgtgaaatattttgtcaagtttgtttatttcctcgttta
caagttttcattatgaatcaagattggaatgatccgaagtcaaagctacagcagtgttgc
ttaactttacgtaccatggacggtggcgaaccagatattcctatctataaagttatagac
agtattggacccacaaatactcgaatttacacggtggctgtttattttcgtgggaaaaga
ttggcaaaagccacaggccatagtatacagcaagctgaaatgaatgcagctaaaacagct
ttagaaaattccagagaactttttccccaactagaccatcaaaagcgggttattaccaaa
agcatcaatcgacaaaagggaaaattcagcaatgaagaagtcactggagaaatgaaactt
gaagaaaatgaacttaaaagaggaagttatttccctgtggatgattcacacttacccaaa
caatatcgcatgcaagaagatatatcaagcgatgaacttgagatatcagatgaagaaaca
ttaatagaaaataaattgaaaaaaaaaccgagaaaacgaaaaaaaaaaaagcgaaagcaa
gcaacgacacctgaaaaaagttttgcaaaaatgcattttaccactttttcagatatcaaa
gaaaatgtagctaaatcatctaaaaatcgatcaaatttgaagcagaaactcgcttatcat
tctatttcttatgaaaatatttttgaagttttaaatgattctctggaaaatatatcttct
tcaactgagatggaatctggtgaaataacttcttga
DBGET
integrated database retrieval system
