KEGG   Condylostylus longicornis: 129616002
Entry
129616002         CDS       T09756                                 
Name
(RefSeq) replication factor C subunit 5 isoform X1
  KO
K10756  replication factor C subunit 3/5
Organism
clon  Condylostylus longicornis
Pathway
clon03030  DNA replication
clon03410  Base excision repair
clon03420  Nucleotide excision repair
clon03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:clon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129616002
   03410 Base excision repair
    129616002
   03420 Nucleotide excision repair
    129616002
   03430 Mismatch repair
    129616002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clon03032]
    129616002
   03036 Chromosome and associated proteins [BR:clon03036]
    129616002
   03400 DNA repair and recombination proteins [BR:clon03400]
    129616002
DNA replication proteins [BR:clon03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129616002
  DNA Replication Termination Factors
   ELG1-RFC complex
    129616002
Chromosome and associated proteins [BR:clon03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129616002
DNA repair and recombination proteins [BR:clon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129616002
  Check point factors
   HRAD17(Rad24)-RFC complex
    129616002
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 Rep_fac_C Rad17 AAA_22 AAA_14 AAA_11 AAA_16 ResIII RuvB_N DEAD AAA_5 AAA_7 DUF815 AAA_19 AAA_24 AAA_assoc_2 AAA_30 Mg_chelatase ATPase_2 Flu_PB2_7th
Other DBs
NCBI-GeneID: 129616002
NCBI-ProteinID: XP_055387396
LinkDB
Position
Unknown
AA seq 355 aa
MNNAVVQSEKSDIPLPWVEKYRPQTLDDLVSHSEIVSTISKLVDGGNLPHLLFYGPPGTG
KTSTILACVKRLYSPTQFKSMVLELNASDDRGINIVRGQILNFASTRTIFSGAFKLIILD
EADAMTNDAQNALRRIIEKYTENVRFCLICNFLSKIIPAVQSRCTKFRFAPLSSDQILPR
LNLIIQNESLKATEDGKKALLALSKGDMRKVVNTLQSTSMAFDIVNEINVYTCVGHPLRS
DIERILLSLMSSTEFEKCYNGKYSWSYIENLRNKLVFVSEITKIKADKALALEDILVEIQ
LYVMRMEIPINVLNKIIVKISEMEERLSKGCKEIPQITALISTFFKCRNMITITS
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgaataacgcagtagtgcaaagtgaaaagtctgacattcctctcccatgggtagaaaaa
tatcgacctcaaaccttagacgatttagtgtcgcactctgaaattgtttcaacaattagc
aaattagttgatggtggcaacctgccgcatttgttattttatggacctcccgggactggg
aaaaccagtacgattttggcgtgtgtaaaacggttgtattcccccacgcaattcaaatcc
atggttctcgaattaaatgcttctgatgacagagggattaatatagttcgtgggcaaata
ttaaatttcgcttctactaggactattttcagtggtgcttttaaattaattattttagat
gaggctgatgccatgaccaatgacgcgcaaaatgctttaaggagaattatagaaaaatac
actgaaaatgtcagattctgccttatatgcaactttctgagcaaaataatccctgcagta
caatcgcgttgcacgaaatttcgctttgctcctttgtcttctgatcaaattcttcctagg
ctaaacctaatcatacaaaatgaatcactgaaagcgacagaagatgggaaaaaagctttg
cttgctttatccaaaggagatatgcgaaaagttgttaatacattgcaaagcacttctatg
gcatttgatattgttaacgaaattaatgtttacacatgtgttggacatccacttcgaagc
gatattgaacggattctgctttccttaatgtcatcaactgaatttgagaaatgttataat
ggtaaatatagctggagttatatagaaaatcttaggaataaactcgtttttgtttcagaa
attacgaaaataaaagctgataaagctctcgctctcgaagatatattagtagaaatacaa
ctttatgttatgaggatggaaattccaataaatgttttaaacaagataattgttaagata
tctgagatggaagaaagattatctaaaggttgtaaggaaattcctcaaataactgcatta
atatcaactttttttaagtgccggaatatgataacaattacttcttaa

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