Condylostylus longicornis: 129616076
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Entry
129616076 CDS
T09756
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
clon
Condylostylus longicornis
Pathway
clon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129616076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clon03041
]
129616076
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129616076
Spliceosome [BR:
clon03041
]
Complex C
Other components
Step II factors
129616076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_30
AAA_16
Motif
Other DBs
NCBI-GeneID:
129616076
NCBI-ProteinID:
XP_055387520
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MEELQKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLAEKNKSFESFKKVLLENGAEFP
DSFITNLLRIIQLMKPSARSSNSQEAKDSFELLDEIEQKDKLAMKFPGLAIPNAKPKVVI
DQEKEELEEKIIDDAMAELEALAPSQTAKKEENKTEQKHGDRKRSRTRSKSREKSDRKRS
IYKDKERERNRDKERRRSRSRDKKYRSKSRERRRSRSRDRRRSRSPRRRSRSPRRRSRSR
DRRRSRSNDRRNNRDCKRRSSRSPAPYKVKRRSPTPMPDDPEPGKIYSGKVANIVPFGCF
VHLFGLRKRWEGLVHISQLRSEGRVSDVNEVVNRGNSVKVKVLSIVGQKVSLSMKDVDQE
TGRDLNPLSHAPDLNESLDRNPDRPIGGTSMLHLQGTGGDAEEDESRKRVTRISSPERWE
IKQMISSGVIDRSELPDFDEETGLLPKDEDDEEDIEIEIVEEEPPFLQGHGRALHDLSPV
RIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEMDTIPTGLNKNWIDPLPEGMQDFSC
DNFSPVNYEFTLNLFVTEESRTLAANVRGVGMAPQEVPEWKKHIIGGKKSSFGKKTDMSL
VEQRQSLPIYKLRDDLIKAVSDNQILIVIGETGSGKTTQITQYLAECGFTARGKVGCTQP
RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLVDLDLKS
YSVIMLDEAHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIP
GRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMK
SLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIFYVVDPG
FVKQKVYNSKTGMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVP
EIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEILHSLSALDDEGLLTRLGR
RMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQSVADQKKAKFNQI
EGDHLTLLAVYNSWKNNKFSNPWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK
NTVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTT
KEYMREVTTIDPKWLVEFAPSFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRR
RRN
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattacagaaactagagcacctttccttggtttctaaaatatgtacggaactc
gataaccacttaggattaaatgacaaagatttagctgagtttataattgatttggcagaa
aaaaataaatcttttgagtcatttaaaaaagttcttttagaaaatggagctgaatttcca
gattcttttattacaaatttattacgtattatacaattgatgaaaccttcagctagatct
tctaactcacaggaagccaaagattcttttgaattattggacgaaatagagcaaaaagac
aaacttgccatgaaatttcctggtttagctattccaaacgcaaaaccgaaagttgtcatc
gatcaagaaaaagaagaactcgaagaaaaaattatagatgatgctatggcggagcttgaa
gcattagcgccaagccagactgcaaaaaaagaagagaataaaacggagcaaaagcatgga
gatagaaaacgttcaagaactcgaagtaaaagcagagaaaaaagtgacagaaaacgaagt
atatacaaagataaagaacgagaacgaaatagagacaaagaacgaagaagaagccgttca
agagataaaaaatatagaagtaaatcaagggagagaagaaggtcgaggagtcgtgatcgt
agaagaagtaggtccccaagacgacgaagtagatctccaagacgaagaagtagatcccgt
gatcgcagaagaagccggtcaaatgacagaagaaataacagggattgtaaaagaagatct
agtcgttccccagcgccatataaagtaaaacgacgtagtccaactccaatgccagacgat
ccagaaccaggaaagatttactctgggaaagttgccaatattgttccatttggttgcttt
gttcatcttttcggcttgcgaaaaagatgggaaggattagtgcacatatcgcaattgcga
tctgaaggaagagtaagtgatgttaatgaggttgttaatcgcggcaattctgttaaagtg
aaagtcctttcaattgttggacaaaaagtatctttgtcaatgaaagacgtagatcaagaa
actgggcgggacttgaatccgttatcacacgcacctgatttaaatgaatccttagacaga
aacccagatagacctattggagggacatctatgttgcatttgcagggtactggtggagat
gctgaggaagatgaaagtcgaaaacgagttaccagaatatcaagtccagaacgctgggaa
attaaacaaatgatttcatcaggtgtcattgatcgaagtgagttgccagattttgatgaa
gaaaccggtcttttacctaaagacgaagatgatgaggaagatatagaaatcgaaatagta
gaagaagagcccccttttctgcagggccacggccgtgctttacatgatttatcccctgtt
cgaatagtaaaaaatcctgatgggtctttagcgcaagctgctatgatgcagtccgcttta
tcaaaagaaagaagagaacaaaaaatgttacaacgggaacaagaaatggatacgatccct
actggtttaaataaaaactggatcgacccactacctgaaggtatgcaagatttttcttgt
gataatttttcaccagtaaattatgaatttactttaaatttatttgttacagaggagagc
cgtaccttagcggctaatgtacgaggagtaggaatggctccgcaagaggttccagaatgg
aaaaagcatatcatcggaggaaaaaagtcctcatttggaaagaaaactgatatgtcttta
gttgaacaaaggcagtctctaccaatttataaattacgtgacgatttaattaaggcagtt
tctgacaatcaaattctcattgttattggtgaaactggttcaggtaaaactactcaaatt
actcagtacttggcagaatgtggctttacagcaagaggaaaagttggttgcacacagcct
cgtcgtgtggcggctatgtcagtggctaaacgggtggcagaagaatttgggtgtcgttta
ggacaggaagttggttatactattcgttttgaagactgcacaagcccagagactgttatc
aaatacatgacagatggtatgttactccgagagtgtcttgttgatttggatcttaaatca
tattcggtgattatgttggatgaagctcatgaaagaacaattcacacggacgttttattt
gggttactcaaacaagctgtacaaaaaagaccggaattaaaattgattgtaacgtctgcc
actcttgatgcagtaaaattttcgcaatacttttttgaggcaccaattttcactatccct
ggtcgaacatttccagtggaagttctatatactaaggaaccagaaactgattatttagat
gcgtcgttaataacagtcatgcaaattcatctaagagaacctcctggtgatatcctatta
tttttaactggacaagaagaaatcgacaccgcttgtgaaatcctatatgaaagaatgaaa
agtttaggtccagatgttccagagttaataatactaccagtttattctgctttaccatca
gaaatgcaaacaagaatttttgatccagcacctcctggaagtcgcaaggtcgtcattgct
acaaacattgctgaaacttccctcactatcgatggaatattttacgttgtagatcctgga
tttgtaaagcaaaaggtgtataattctaaaacaggaatggattccttgattgttactcca
atttcacaagccgctgcgaaacaacgagcgggcagagcaggacgcactggtcctggaaaa
tgttatcgtctttatactgaacgtgcttatcgcgatgaaatgttacccacacctgttccc
gaaattcaaagaactaatttagctacaaccgttttacagcttaaaacaatgggaattaat
gatttattgcacttcgattttatggacgccccgcctgtagaatcacttgttatggcttta
gaaattttacattccctatctgctttagatgatgaaggattattaacacgcttaggtcgc
cggatggcagaatttccgttggaaccaaatctttctaaaatgttaataatgtcggttgct
ttacagtgctctgacgagattttaaccatcgtatctatgcttagtgtacaaaacgtattt
tatcgaccaaaagacaagcagtccgtcgccgatcaaaaaaaagcaaagttcaatcaaata
gaaggtgatcatttaaccttgttagcagtttacaatagttggaaaaataataaattctca
aatccatggtgttatgaaaattttgtgcaaattagaactttaaagcgagcacaagatgtt
cgtaagcagttattaggcataatggatcgccataaattggatgtagtttcagctgggaag
aacacagttcgtattcaaaaagcgatttgttcaggattctttagaaatgctgccaaaaaa
gatcctcaagagggttatcgaactttggtcgactcacaagttgtatacatacatccatca
agtgcattatttaatcgtcaacctgaatgggtagtttatcacgaattggttcaaacaaca
aaggaatatatgcgagaagttactacgattgatccaaaatggctggttgaatttgctcca
tcattttttaaattctctgatccaactaaattaagtaaattcaagaaaaatcagcgttta
gaacctttatacaataaatatgaagaaccaaatgcttggagaatatctcgagtacgtaga
aggcgaaattaa
DBGET
integrated database retrieval system
