Condylostylus longicornis: 129616106
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Entry
129616106 CDS
T09756
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
clon
Condylostylus longicornis
Pathway
clon03040
Spliceosome
clon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129616106
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129616106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clon03041
]
129616106
04121 Ubiquitin system [BR:
clon04121
]
129616106
03400 DNA repair and recombination proteins [BR:
clon03400
]
129616106
Enzymes [BR:
clon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129616106
Spliceosome [BR:
clon03041
]
Complex B
Other components
Prp19 complex
129616106
Complex C
Prp19-CDC5 complex
129616106
Ubiquitin system [BR:
clon04121
]
Ubiquitin ligases (E3)
U-box type E3
129616106
DNA repair and recombination proteins [BR:
clon03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
129616106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Prp19
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_IFT122_1st
U-box
Beta-prop_DCAF12
eIF2A
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_like
Cytochrom_D1
PROPPIN
PAS_11
Phyto-Amp
Motif
Other DBs
NCBI-GeneID:
129616106
NCBI-ProteinID:
XP_055387552
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MALICAITNEVPDVPVVSPVSGAIFEKRIIEKYLLENGCDPINGKELKAEDLIEIKTPPI
VRPKPPSATSIPATLKTMQDEWDALMLHAFTQRQQLQTARQELSHSLYQHDAACRVIARL
NKEVAAAREALATLKPQAGISTATAGATNIPQPAIASEAGGVATQPIEQAGMSAEVIQKL
QDKATVLTQERKKRGRTVPEELATQEQIKSFLTVASHPGLHSASVPGILALDINSSDNSK
ILTGGNDKNATVFNKDTEQVVAILKGHAKKITKVIYHPDEDTVITGSPDATIRIWNVPAC
QTQLLLRCHDSAVTGLSLHPTGDYVLSTSSDRHWAFSDIRTGRLLTKVIDTAEVGLTTAQ
FHPDGLIFGTGTDDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVK
LWDLRKLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGTDVRIYLCKQWQDLIIFNDHTAL
ATGVRFGKHAQYLASTSMDRTLKLYAIE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcattaatttgcgcaattacaaacgaagttccagatgtcccagtagtatcacccgtt
tcaggagcaatttttgaaaagcgaattatagaaaaatatcttttagaaaatgggtgcgat
ccaattaatggaaaagaattaaaagcagaagatttgatagaaattaaaacgccgcccatt
gttagacctaagccgccaagcgcaacttcaattcccgcaacactgaaaacaatgcaagat
gagtgggatgctttgatgcttcacgcgtttacccaacgacaacaattacaaaccgctcgt
caggaactaagtcattctctttaccaacatgatgccgcttgtcgtgtaattgctcgctta
aataaggaagtagcggccgcaagagaagccctagcaacacttaaaccacaagctggtata
tctacggcaacagctggtgcgacaaatattccacaacccgcaattgcttcagaagcgggt
ggtgttgcaacgcagccaatagagcaagctggtatgagtgccgaagttatacaaaaatta
caggacaaagcaaccgtattaacgcaagagcgaaaaaaacgtggtcgtactgtaccagag
gaattagcaacccaagaacaaataaaatcgttcttgacagtagcatcacatccaggattg
cattcggcatcggttccaggcattttagccttggatataaatagctccgataacagcaaa
attttaacaggcggaaacgataaaaatgctacagtatttaataaagatacagaacaagtg
gttgctatactgaaaggtcatgctaaaaaaataactaaagtaatatatcatccagatgaa
gatactgtaataactggttctcctgatgcaacgattcgcatttggaatgtacccgcttgc
caaactcagttacttttgcgatgtcatgacagtgcggttacgggtttatctttacatcct
acaggggactatgtcctttcaacatcttcagatcgtcattgggcgttctctgatattcgc
accggtagacttttaactaaagtaatagacacagccgaagttggcttaacaactgcacaa
tttcatcctgatggcttgatttttggtactggtactgatgattctcaagtaaaaatttgg
gatttaaaagaacaaagtaatgtcgcgaattttccgggtcacaccggtccgatatcggcg
atttcgttttcagaaaatggttattatctcgctacagcagcagatgatgcttgcgttaaa
ttatgggatttgaggaaattaaaaaatttcaagactattcaattagatgatggatacgaa
gtaaaagatttatgttttgatcaaagcggaacatatttggctattgctgggacggatgtt
agaatatatctttgtaaacaatggcaagatttaataattttcaatgaccacacagcgttg
gctactggtgttagatttggaaaacatgcccaatatttggcctctactagcatggataga
accttaaaattatatgcaattgaatag
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