KEGG   Condylostylus longicornis: 129616106
Entry
129616106         CDS       T09756                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
clon  Condylostylus longicornis
Pathway
clon03040  Spliceosome
clon04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:clon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129616106
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129616106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clon03041]
    129616106
   04121 Ubiquitin system [BR:clon04121]
    129616106
   03400 DNA repair and recombination proteins [BR:clon03400]
    129616106
Enzymes [BR:clon01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129616106
Spliceosome [BR:clon03041]
 Complex B
  Other components
   Prp19 complex
    129616106
 Complex C
   Prp19-CDC5 complex
    129616106
Ubiquitin system [BR:clon04121]
 Ubiquitin ligases (E3)
  U-box type E3
   129616106
DNA repair and recombination proteins [BR:clon03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    129616106
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Prp19 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_IFT122_1st U-box Beta-prop_DCAF12 eIF2A Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N WD40_like Cytochrom_D1 PROPPIN PAS_11 Phyto-Amp
Other DBs
NCBI-GeneID: 129616106
NCBI-ProteinID: XP_055387552
LinkDB
Position
Unknown
AA seq 508 aa
MALICAITNEVPDVPVVSPVSGAIFEKRIIEKYLLENGCDPINGKELKAEDLIEIKTPPI
VRPKPPSATSIPATLKTMQDEWDALMLHAFTQRQQLQTARQELSHSLYQHDAACRVIARL
NKEVAAAREALATLKPQAGISTATAGATNIPQPAIASEAGGVATQPIEQAGMSAEVIQKL
QDKATVLTQERKKRGRTVPEELATQEQIKSFLTVASHPGLHSASVPGILALDINSSDNSK
ILTGGNDKNATVFNKDTEQVVAILKGHAKKITKVIYHPDEDTVITGSPDATIRIWNVPAC
QTQLLLRCHDSAVTGLSLHPTGDYVLSTSSDRHWAFSDIRTGRLLTKVIDTAEVGLTTAQ
FHPDGLIFGTGTDDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVK
LWDLRKLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGTDVRIYLCKQWQDLIIFNDHTAL
ATGVRFGKHAQYLASTSMDRTLKLYAIE
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcattaatttgcgcaattacaaacgaagttccagatgtcccagtagtatcacccgtt
tcaggagcaatttttgaaaagcgaattatagaaaaatatcttttagaaaatgggtgcgat
ccaattaatggaaaagaattaaaagcagaagatttgatagaaattaaaacgccgcccatt
gttagacctaagccgccaagcgcaacttcaattcccgcaacactgaaaacaatgcaagat
gagtgggatgctttgatgcttcacgcgtttacccaacgacaacaattacaaaccgctcgt
caggaactaagtcattctctttaccaacatgatgccgcttgtcgtgtaattgctcgctta
aataaggaagtagcggccgcaagagaagccctagcaacacttaaaccacaagctggtata
tctacggcaacagctggtgcgacaaatattccacaacccgcaattgcttcagaagcgggt
ggtgttgcaacgcagccaatagagcaagctggtatgagtgccgaagttatacaaaaatta
caggacaaagcaaccgtattaacgcaagagcgaaaaaaacgtggtcgtactgtaccagag
gaattagcaacccaagaacaaataaaatcgttcttgacagtagcatcacatccaggattg
cattcggcatcggttccaggcattttagccttggatataaatagctccgataacagcaaa
attttaacaggcggaaacgataaaaatgctacagtatttaataaagatacagaacaagtg
gttgctatactgaaaggtcatgctaaaaaaataactaaagtaatatatcatccagatgaa
gatactgtaataactggttctcctgatgcaacgattcgcatttggaatgtacccgcttgc
caaactcagttacttttgcgatgtcatgacagtgcggttacgggtttatctttacatcct
acaggggactatgtcctttcaacatcttcagatcgtcattgggcgttctctgatattcgc
accggtagacttttaactaaagtaatagacacagccgaagttggcttaacaactgcacaa
tttcatcctgatggcttgatttttggtactggtactgatgattctcaagtaaaaatttgg
gatttaaaagaacaaagtaatgtcgcgaattttccgggtcacaccggtccgatatcggcg
atttcgttttcagaaaatggttattatctcgctacagcagcagatgatgcttgcgttaaa
ttatgggatttgaggaaattaaaaaatttcaagactattcaattagatgatggatacgaa
gtaaaagatttatgttttgatcaaagcggaacatatttggctattgctgggacggatgtt
agaatatatctttgtaaacaatggcaagatttaataattttcaatgaccacacagcgttg
gctactggtgttagatttggaaaacatgcccaatatttggcctctactagcatggataga
accttaaaattatatgcaattgaatag

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