Condylostylus longicornis: 129617484
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Entry
129617484 CDS
T09756
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
clon
Condylostylus longicornis
Pathway
clon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129617484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clon03041
]
129617484
03009 Ribosome biogenesis [BR:
clon03009
]
129617484
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129617484
Spliceosome [BR:
clon03041
]
Complex A
U1 snRNP components
U1 related factors
129617484
Complex B
129617484
Ribosome biogenesis [BR:
clon03009
]
Eukaryotic type
Pre-60S particles
Helicases
129617484
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
UTP25
DUF1907
Motif
Other DBs
NCBI-GeneID:
129617484
NCBI-ProteinID:
XP_055388657
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MFKIITTSLPKFFKLSNFSTNLLKPKLVVGHYNFCKNYRILSSERYSSILLNFKKLKGDK
VSYLTSLNEENMPPHWESKNNRGGNGNGGGKDKGRGVKSGRIEKNRVNGDRRGGGNGMGN
KKGKFQLGSGDADLPSVDWSNESLEPFQKNFYKERPRVRNRSPYEVEKYRRQNEITVRGA
APNPIENFDECDMPDYCSNEIRRQGFKAPTPIQAQSWPIAMSGFNLVGIAKTGSGKTLGY
ILPAVVHINSQKPLKRGDGPIALVLAPTRELAQQIKEVATDFGSSTYVRNTCLFGGAPRG
GQARDLERGVEIVIATPGRLIDFLSQGKTNLRRCTYLVLDEADRMLDMGFEPQIRKILNQ
IRPDRQTLMWSATWPREVQQLAEDFLGDYIQINIGSLELSANHNIKQYVDVCHEHDKQEK
LKALLANIYDESEQPGKVIIFVETKRRVDSLAKFIRSFGVRCGAIHGDKSQSERDFVLRE
FRSGVCNILVATDVAARGLDVDGIKHVVNFDYPQSSEDYVHRIGRTGRSEQTGKSYTFIT
KNNSKQTRALLQVLREANQDINPALEDLARNTRGGDFSNNFRRYGTGLKKGSINSGNFND
RNRSNDRNGRDGGGFRNDHNRNNGGMNNNGGFNNNRQNRHIKYD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaattattacaactagtttacccaaattttttaaattaagcaatttcagcaca
aatttgcttaaaccaaagttagtggtcggccattacaatttttgtaaaaactacaggata
ttgtcatcagaaagatattcaagtatcttattaaattttaaaaagttaaaaggcgataaa
gtttcgtatttaacaagtttaaacgaagaaaatatgccaccacattgggagtctaaaaat
aatcgtggaggaaacggaaatggtgggggaaaagataaaggacgtggagtaaaatctggt
cgaattgaaaaaaatcgtgtgaatggagatcgtaggggaggaggaaatggaatgggtaat
aaaaaaggaaaatttcaattgggtagtggtgatgctgacttaccgtcagttgactggtcc
aatgaaagtttggaaccattccaaaagaatttctataaggaacgtccaagagttagaaat
cgatccccgtatgaagttgaaaaatacagaagacaaaatgaaattactgtaagaggagca
gctccaaatcctattgaaaattttgatgaatgtgatatgccagattattgctcaaatgaa
atcagacgtcaaggttttaaagcaccaacaccaattcaagctcaatcttggccaatcgct
atgagtggtttcaatttggttggtattgctaaaactggctcgggaaaaacacttggttat
atattgccagctgttgttcacattaacagtcaaaaaccgttaaaaagaggtgatggccca
attgcattagttttagctccaactagagaattagcgcaacaaataaaggaggttgctact
gattttggatcgtcgacctatgttcgcaacacatgcctttttggtggagcaccacgtggt
ggacaagctcgggacttggaacgtggagttgaaatcgttatagcaacaccgggtcgttta
attgacttcttatcacagggtaaaacgaatttgaggcgttgtacatatttagtacttgat
gaagctgatcgtatgcttgatatgggtttcgaaccacaaattcgtaagattttaaaccaa
attcgaccagatcgtcaaactcttatgtggagcgctacttggccacgtgaagtacaacaa
ttggcagaagactttttaggagattacatccaaattaatattggttcattggaattatct
gcaaaccacaacataaaacagtatgttgatgtttgccatgaacatgataaacaagaaaaa
ttgaaagctttgttggctaatatatacgacgaatctgagcaaccaggaaaagttataatt
tttgttgaaacaaaacgtcgtgttgatagtttagcaaagtttataagaagttttggtgtc
cgatgtggagctatacatggtgataaatcacagtcagaacgtgattttgtattaagagaa
tttcgttctggcgtttgtaacattttagtagctacagatgtagctgctagaggactggat
gtcgatggtataaaacatgtggtcaactttgattatccacaatcatctgaggattatgta
catagaattggtagaactggaaggtctgaacaaaccggaaaatcatatacattcattacg
aaaaataattcaaaacagacgagagcattactacaagtattacgggaagcaaatcaagat
attaatcctgcgttggaagatcttgctagaaatacgcgaggtggagatttcagtaataac
ttccgcagatatggtacaggattgaaaaaaggctcaattaatagcggtaatttcaatgat
agaaatcgttctaatgatagaaatggccgtgacggtggtggttttagaaatgatcataac
cgaaacaatggtggaatgaacaataatggcggatttaataacaacagacaaaataggcat
atcaaatatgattaa
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integrated database retrieval system
