Clostridium sp. OS1-26: RCG18_01105
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Entry
RCG18_01105 CDS
T11102
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cloo Clostridium sp. OS1-26
Pathway
cloo00300
Lysine biosynthesis
cloo00470
D-Amino acid metabolism
cloo01100
Metabolic pathways
cloo01110
Biosynthesis of secondary metabolites
cloo01120
Microbial metabolism in diverse environments
cloo01230
Biosynthesis of amino acids
Module
cloo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
cloo_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RCG18_01105 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RCG18_01105 (dapF)
Enzymes [BR:
cloo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RCG18_01105 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Draxin
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WML35389
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Position
complement(202301..203122)
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AA seq
273 aa
AA seq
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MKFTKMNGNGNDFIVVDDRNGMFLGKEGELARKLCNRNFGIGGDGILIVRNSDIAQTQMI
IINSDGSYASMCGNGIRCFAKYVWDEGIAKGDCIKIETGDGIKEAFIHVRDDEAKEVTIN
MGTPAFAPEQIPSKFDKEIINEQIKINGKEYNITTMFMGVPHTVLFGKLDEYDIQEGKVI
EKYDMFPEGTNVNFCEVINDNKIRVKTWERGAGPTLACGTGSCACVIASNRLGFTGKNVE
VQVPGGKLFIEIKENEVFMTGPAVVSFKGEYEV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacgaaaatgaatggtaatggaaatgactttatagtagttgatgatagaaat
ggtatgtttttaggaaaagaaggagaacttgcaaggaaactttgtaacagaaattttgga
attggcggagatggaatattaatagttagaaatagcgatattgcacaaacgcaaatgatt
attataaactcagatggttcttatgcttccatgtgtggcaatggtataaggtgctttgca
aaatatgtttgggatgaaggaatcgcaaaaggagattgcataaaaatagaaactggagat
ggaataaaagaggcttttatccatgtaagagatgatgaagcgaaagaggttacaattaac
atggggaccccggcctttgctccagaacaaataccttctaagtttgataaagaaattata
aatgaacaaataaaaattaatggcaaagaatataatataacaactatgtttatgggtgta
ccccacacagttttatttggaaagcttgatgagtatgatattcaggaaggaaaagttata
gaaaaatatgatatgtttccagaaggaactaatgttaatttttgtgaagttataaacgat
aataaaattagagttaagacctgggaaagaggtgcaggacctactttggcttgtggaact
ggaagttgtgcttgtgtaatagcttccaataggttgggttttacaggtaaaaatgtagaa
gttcaagtaccaggtggaaaactatttatagaaataaaagaaaatgaagtatttatgaca
ggacctgcagtagtttcttttaaaggggaatatgaagtttaa
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