Clostridium sp. OS1-26: RCG18_01235
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Entry
RCG18_01235 CDS
T11102
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cloo Clostridium sp. OS1-26
Pathway
cloo00550
Peptidoglycan biosynthesis
cloo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RCG18_01235
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cloo01011
]
RCG18_01235
Peptidoglycan biosynthesis and degradation proteins [BR:
cloo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RCG18_01235
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PBP_dimer_2
TACO1_YebC_N
Motif
Other DBs
NCBI-ProteinID:
WML35413
LinkDB
All DBs
Position
complement(228738..230882)
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AA seq
714 aa
AA seq
DB search
MVVIFSFLFLAFLLMFGRMFYIMVYQSHKLKSLAIDQWTSEVKIDAKRGRILDRNGRELA
VSANVYRVDLDMNTLRDTMKEKKLSQDEIAEKLSGALAMDKGEVSKVLGKTLPGGLPLGS
ATLKRRIEKEEADKVRNLNLRGVLISADTKRYYPNNNFLAHVLGHTNSDGNGLTGVELNY
NKELSGTPGVRIAETDRKSKELPYTISEYTKPIDGKDVVLTIDDMIQHFVEKAADQALKD
NQAKAVSIVVMDPKNGEVLAMVNKPDYNPNDPWIKGMSYDELQKSWRNRAVSDTFEPGSI
FKVITATAALEENAVSESDKYTCGGSFTVGKKIIHCWKTSGHGEQSFVEILKNSCNVGFA
AVGKKVGKENLYKYIKKFGFGEKTGIDLPGEAKGIIKKPENISEIDLATISFGQTNTVSP
IQFITAFNAIANGGTLIKPHIMKEISRYDDEKDNKVIDKQFDISGDNSKQIIDANKASQL
RGYLEKVVSEGGGKKAFIEGYHIGGKTGTAQKAGQGGYQPGKYISSFIGMAPANDPKITV
LVSIDEPDPSNYYAGQITAPVAQQVFNDIFNYLAMKSDADSQDIARSMLKDVVIPDVRGM
KKADAEKALKEQHLNSESDSNGEYIVDMNPKPGYTVKEGSKIILYTGSTPNYNKVVTVPD
VQGLSRDRAVAVFNSVGLKADFEGDGMISEQSIEPGKEVEKGTVIILHTDILGD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggtagttattttcagctttcttttcttagccttcctcttgatgtttggtaggatgttt
tacataatggtatatcagtctcataaattgaaatccctagcaatagatcaatggacaagc
gaggtaaaaattgatgctaaaagaggaaggatacttgatcgtaatggccgtgaactagca
gtaagtgctaacgtttatagagtagatttggatatgaacaccttaagagacactatgaaa
gagaaaaagttgtcccaagatgagatagcagaaaagcttagtggggctttagccatggac
aagggtgaggtttcaaaagtattaggtaaaacacttccaggaggacttcctcttggctca
gccacattaaaaagaagaattgaaaaagaagaagctgataaggtcagaaatttgaactta
agaggggtattgatatcagctgataccaagagatattaccctaataataattttttagct
catgtgcttgggcatactaattcagacggaaatgggctaaccggtgttgagcttaattat
aacaaagagctatctggaactccaggagttagaattgcagagaccgatagaaagagtaag
gaacttccatacacaatttctgaatatactaagcctatagatggtaaagatgtagtttta
acaatagatgatatgattcaacactttgtagaaaaagctgcagaccaagcactgaaggat
aatcaggcaaaggctgtctctatagttgttatggatcctaaaaatggagaagtacttgct
atggttaacaaaccagattataacccaaatgacccttggattaagggtatgtcctacgat
gaacttcaaaagagctggagaaacagagcggtaagtgatacttttgaacctggatcaatt
tttaaggtaataacagcaacggcagctttagaagaaaatgctgttagtgaaagtgataag
tatacctgcggcggaagttttactgtggggaaaaaaataatacactgttggaaaacttct
ggacatggagaacaaagttttgttgaaatacttaaaaactcctgtaacgttggttttgcc
gcagttggtaaaaaagtaggtaaagaaaatctatataaatatattaaaaagtttggtttt
ggagaaaagacaggtatagatttaccaggagaagcaaaaggaattatcaaaaagcctgag
aacataagtgagattgatttagctactatatcttttggacagactaatacggtttcacct
attcagtttattactgcctttaacgccatagctaatggtggaactttgataaaacctcac
attatgaaagaaatatctcgttacgacgatgaaaaagataataaagttatcgataagcag
tttgatatttcaggagataatagtaaacaaataatagatgctaacaaagcttcacagctt
agagggtatttagaaaaagttgtttcagaaggtggcggtaaaaaagcctttatagaaggg
tatcatataggtggaaaaactggaacagctcaaaaagcaggtcaaggagggtaccaacca
ggaaaatatatatcttcatttataggcatggcacctgcaaacgaccctaaaataacagtc
ttagtgtcaatagatgaaccggatccatctaattactatgctggtcaaataacagcacca
gtagcacagcaggtatttaatgatatatttaattatctagctatgaagagtgatgcagat
agccaggatattgctagaagcatgctaaaggatgtagttataccagatgtaaggggcatg
aagaaggctgatgctgaaaaggcccttaaagaacagcatttaaatagtgaatctgattct
aatggagaatatattgtagatatgaatcctaaaccaggatatacagtaaaggaaggtagc
aaaattattctttacacaggcagcacaccaaactataataaagtagtaacagttccagat
gttcaaggtttaagtagggatagagctgttgctgtatttaatagcgtaggacttaaagca
gactttgagggagatggaatgatatcggaacaaagtatagaaccaggaaaagaagttgaa
aaaggaacggttataattctccatactgatatattaggagactaa
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