Clostridium sp. OS1-26: RCG18_01870
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Entry
RCG18_01870 CDS
T11102
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cloo Clostridium sp. OS1-26
Pathway
cloo03410
Base excision repair
cloo03430
Mismatch repair
cloo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCG18_01870 (recJ)
03430 Mismatch repair
RCG18_01870 (recJ)
03440 Homologous recombination
RCG18_01870 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cloo03400
]
RCG18_01870 (recJ)
DNA repair and recombination proteins [BR:
cloo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RCG18_01870 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RCG18_01870 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RCG18_01870 (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WML37707
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Position
complement(370086..371864)
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AA seq
592 aa
AA seq
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MNSKWMLRRSKIDIKKLSQNTEISEIIASILVNRDVNTEEDIRKFMNPDIGYLHNPLLMK
DMDKGTDIMINALKNNKKIVVYGDYDADGIISTYILYSSLLRCEANVKYHIPDRITEGYG
INSESLKQLKEEGYEVLITCDNGISAIEQIKLAKELGMSVIVTDHHDIPFIELENNQREF
VVPQADAVINPKQKDCSYPFKSLCGAGVAFKFIQVLYEKMGINKEEAYDFMQYAAIGTIC
DVVDLVDENRIIAKNGLRMINQTQNIGIKALIKATSLEGKKISSYHIGFVLGPCINATGR
LESANLALQLLLHKDEKGASELATKLHALNIERQNMTVESVNEIIDIIENSKMKDDKVLV
VYKPDVHESIAGIVAGRLKEKYNVPSIVLTQGEKMPKGSGRSIEEYNMFEELIKCKDLIE
KFGGHPLAAGLSIKEENIDKLRKALNDSCVLTNEDTIPKIRIDKQLNLNEITFKLIEDIE
QLEPFGKGNSAPIFAEKNVTIFRAYFIGKEKNILKLYCRPQGSFEKIDAICFDGAEKFKT
LIEDTYGEEKLLDILNNNPANIKMDLIFSPSINEYNGNTNLQLIIKDFRLTN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ataaatagtaaatggatgttaagacgaagtaaaattgacattaaaaaattatcacaaaac
actgaaataagcgaaatcatagcttccatattagtaaatagagatgtaaacacagaagaa
gatataagaaaatttatgaaccctgatataggttacttacataatccgctgctaatgaag
gacatggacaaaggcacagatataatgataaatgctttaaaaaataacaaaaaaattgta
gtctatggagactatgatgcggatggaataatcagcacatatattttgtattcatcatta
ttgagatgtgaagccaacgtaaaataccatataccagacagaattactgaaggatatggc
ataaatagtgaaagcttaaaacagttaaaagaagagggatatgaagttttaataacttgt
gacaatggtatttcagctattgagcaaattaaacttgccaaagagctcggcatgagtgtt
atagttacagatcatcatgatataccttttatagaacttgaaaataatcaaagagaattt
gtagttcctcaagcggatgctgtaataaatccaaaacaaaaagattgcagttatcccttt
aagtctctatgtggagcaggagttgcatttaagtttattcaagtactttatgaaaaaatg
ggtataaataaagaagaagcttatgattttatgcagtatgcggcaataggaacaatatgc
gatgttgtagatttagttgatgaaaacagaataattgctaaaaatggattgagaatgata
aaccagactcaaaatataggaataaaagcattaataaaagcaacgtcactagagggaaaa
aaaataagctcttatcatataggttttgtcttaggaccttgtattaatgctacaggaaga
ttggaaagtgctaacttagcgctgcaacttttactacataaagatgaaaaaggagcatca
gagcttgcaacaaagcttcatgctttaaatatagaaagacagaacatgaccgttgaaagt
gtaaatgaaattatagacataatagaaaattctaaaatgaaggacgataaagttttagtt
gtatataagccagatgtccacgaaagtatagccggaatagtggcgggaaggcttaaggaa
aaatataatgttccatcaattgtgctaacgcaaggtgaaaaaatgcctaagggctctggc
aggtctatcgaagaatataatatgttcgaagaacttataaaatgcaaagatctaattgaa
aagtttggaggacatcctttagcggctggattatcaataaaagaagaaaatatagataag
ttaagaaaggctttaaatgatagctgtgttctgaccaatgaagatacaatacctaaaata
agaatagataaacagttgaatttaaatgaaataacatttaaattaattgaggatatagaa
cagctagaaccttttggaaaggggaactccgcgcctatttttgcagaaaaaaatgtaacc
atatttagagcctattttataggaaaagaaaagaatatacttaagctttactgtagacct
caaggaagctttgaaaagattgatgccatatgctttgatggagcagaaaagtttaaaaca
ctgatagaggatacatacggagaagaaaagcttctagatattttaaataataatcctgct
aatataaaaatggatttaatattttcaccgtcaattaatgagtataacgggaataccaat
ctacagctaattataaaggactttagattaacaaactag
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