Clostridium sp. OS1-26: RCG18_03820
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Entry
RCG18_03820 CDS
T11102
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
cloo Clostridium sp. OS1-26
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RCG18_03820 (tnpB)
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Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
TackOD1
zf-piccolo
Motif
Other DBs
NCBI-ProteinID:
WML35884
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Position
complement(768394..769500)
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AA seq
368 aa
AA seq
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MEKTFKFRLAPTKEQEIMLSKAFGSCRFVYNYYLDKKIKLYKSEGKSMSYGECANDMKKL
KNQYEWLKEIDAISLQQSLRDLDKAYKNFFKGSGFPKFKSKHNHNQSYRTQTVNKNIKIE
GNKIKLPKIGWVEFKKHREIQGKILNVTVSRMPSNKCFVSVCCSNIENEKLPQNPNAIGI
DVGIKSFCTISNEENIENPKYLQKSYEKLIKSQRRLSSKTKGSKNYHKARVKLAKIHEKI
ANQRIDFLYKLTSRLIKENQIIVLEDLNVKNMMKNEKLAQKIGDCSWSEFTRLLTYKAEW
YGRTVHKIDTFYPSSQLCSICGYQNAEVKDLNIREWVCPKCDNKHDRDINASKNILKQGL
KELKILVA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagacttttaaatttagattagcaccaactaaagagcaagaaataatgttaagt
aaggcttttggctcttgcagatttgtatataattactaccttgataagaagataaaattg
tacaaaagtgaaggtaaatccatgtcttatggtgagtgtgctaatgatatgaaaaaactt
aaaaatcaatatgagtggcttaaagaaatagatgcaatatcacttcaacagagtttgaga
gatttagataaagcctacaaaaatttctttaagggcagtggattccctaaattcaagagt
aaacataaccataatcaaagttatagaactcaaacggttaataaaaacatcaaaattgag
gggaacaaaattaaactacctaaaattggttgggtagagtttaaaaagcatagagaaatt
caaggtaagatacttaatgttactgtaagcagaatgccttctaataagtgttttgtttca
gtttgttgtagtaatattgagaatgaaaaattacctcaaaatcctaatgcaataggtatt
gatgtaggcataaagtcattttgtactatatctaatgaggaaaatatagaaaatcctaaa
tatcttcaaaagtcttatgaaaagttgataaagtctcaaagaagattaagcagtaaaact
aaaggaagtaagaactatcataaagcaagggttaaacttgccaaaatacatgagaaaatt
gctaatcaaagaatagactttttgtataaattaacttcaagacttataaaagaaaatcaa
attatagttcttgaagatttgaatgtgaaaaacatgatgaagaatgaaaagttagcacaa
aaaataggtgattgcagttggtcggagttcacaagactactcacatataaggctgaatgg
tatggtagaactgtacataaaatagatactttctacccttcaagtcaattatgttcaata
tgtggctatcaaaatgcagaagtaaaggatttaaacataagggaatgggtatgtcctaag
tgtgataataaacatgatagggacatcaatgcaagtaaaaatattcttaaacaagggttg
aaagaactaaaaatattagtagcttaa
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