Clostridium sp. OS1-26: RCG18_08680
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Entry
RCG18_08680 CDS
T11102
Name
(GenBank) FAD-dependent oxidoreductase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
cloo Clostridium sp. OS1-26
Pathway
cloo00630
Glyoxylate and dicarboxylate metabolism
cloo00680
Methane metabolism
cloo01100
Metabolic pathways
cloo01120
Microbial metabolism in diverse environments
cloo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RCG18_08680
09102 Energy metabolism
00680 Methane metabolism
RCG18_08680
Enzymes [BR:
cloo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RCG18_08680
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Molybdopterin
Fer2_4
Fer4_20
Pyr_redox_3
Pyr_redox
Molybdop_Fe4S4
Fer4_7
NAD_binding_8
Fer4_21
Fer4
Fer4_6
Fer4_Nqo3
DAO
HI0933_like
Fer4_15
Thi4
FAD_oxidored
AlaDh_PNT_C
Fer4_2
FAD_binding_2
Fer4_4
GIDA
FAD_binding_3
MurD-like_N
Fer4_9
Amino_oxidase
3HCDH_N
Fer4_10
Fer4_3
Fer4_16
NAD_Gly3P_dh_N
EIF3I
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
WML36684
LinkDB
All DBs
Position
complement(1730812..1734420)
Genome browser
AA seq
1202 aa
AA seq
DB search
MGTIRVNINNRELAAQEGTTILKIALDNGIDIPNLCYDSRMKPYGACGVCVVEIEGNPKL
QRACSTIASDGMVVKTDTARTISARKAAFELLASDHRGDCRPPCVNACPAHTDCQGYVGL
IANGQYEEAIKLVKDVVALPASIGRVCPHPCETACRRQNSDDPIAIAELKRFLGDVDISN
GTFVPDVKDETNKKIAVIGAGPAGISCAYFLAMEGHEVVIYESMPKPGGMLRYGIPQYRL
PKEILDAEIDTLRKMDVEIKCNVKLGADISLPYLQKTYDAVFVAIGAWASSDIGCKGQDM
EGVLGGIDFLRMATQSEPIYMGNKVIVIGGGNTAMDVARTAVRLGAESVKLLYRRTRDEM
PAERIEIEEAEEEGVEFNFLVAPVEITGDGTRATTIRCQKMKLGEADASGRRKPEPIDGE
EITFEADLIVSAIGQRVNADCVKELTTTRKGTIAVNENTFETNIEGVFAGGEASTGPKIA
IEAIAQGKNAAKVIHSYLNGIIIPVANPNYIVQNDLCKKDFEHVEKQNREPQVVVPAEKR
KLSFSPISETFTREAALREASRCLECGCHDYFECRLIKYIGRYNIDTEKICGEKHKRQEE
QNHPFITRNADKCILCGQCVRACEEFIGITAIGLEKRGFDSKVIPEFNLPLQESSCISCG
QCVDVCPTGACIEKEAVKKQVPVDFDNINSVCNYCGVGCNLVLQSKGNLVYKSIPNRSKD
EGLLCIKGRFGINFINDENRIKTSVVRRKGESIEVDLEEALTLISKNLQLVKGQYGDNSV
AILASPRFTNEEAFIIKKIADRLNTSLIGSITASEASGMESVLGYNASTNSYGELYSTDL
IVSIGNVDENHPVMAVKMKYAAREKAKLVSVSSSKTRMEDYANISFNPYNNIEFLKSFIK
ALFDGGYVNEGEVSNKAENLDSLKNYVKDAKDCTDASNLAKMYGEAKKSIIVIDDDIATE
DTCKLLSDAAIVTGKIGKPHSGIIIVRSSSNAQGFIDIGIKAKGMEILEQIKEGKVKAAV
IIGEDPVGDDKDTAEILNNLEFLATLDTFMTDTALISNVVVPIGSFAESEGTLTRSDRKV
QKITPAVRVANVNTLFNNLSKIAQHLDINIINLQQVVEMLSSEIEAYSGLYESDATTDDI
YVPNSRTNTYGSQVLCTDGFNKESRKAVLSLPYSDKMFKDKKVYDSIQMRFDSYLKETGL
NR
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaattagagtgaatataaataatagagagttggctgcacaagaaggaactaca
atattaaaaatagcgcttgataatggaatagacattccgaatctttgttatgacagcaga
atgaaaccctatggtgcatgcggcgtatgtgttgttgaaatagaaggaaatccaaagctt
caaagagcatgttcaacaatagcatcagatggtatggtagtaaaaacagatacagcaaga
actatatctgcaagaaaagctgcttttgagcttttagcatcagatcatagaggagattgt
agacctccatgcgtaaatgcatgtcctgcacatacagattgtcaaggatatgttggttta
attgctaacggacaatatgaagaagcaataaagcttgttaaagatgttgtagcactacca
gcaagtataggaagagtttgccctcatccatgtgaaacagcttgcagacgtcaaaattct
gatgatccgatagcaattgctgaacttaaaagattccttggagatgtagatataagtaat
ggtacatttgtgccagatgttaaagatgaaactaataaaaagattgcagtaattggtgct
ggtccagcaggtatatcttgtgcatacttccttgcaatggaaggtcatgaagttgtaatc
tatgaaagtatgcctaaacctggcggaatgctcaggtacggtataccacaatatcgtctt
cctaaggaaatattagatgctgaaatagataccttaagaaaaatggacgtagagattaaa
tgtaacgttaaacttggtgcagatataagtctaccatatcttcaaaaaacatatgatgct
gtcttcgtagcaataggcgcttgggcaagttcagacattggatgtaaaggccaagatatg
gaaggtgttcttggaggtatagacttcttaagaatggctacacaatcagagccaatatat
atgggtaacaaggttatagttattggcggtggaaacactgctatggacgttgccagaact
gctgtaagacttggagcagaaagcgttaaacttctatatagaaggaccagagacgaaatg
cctgcagaaagaattgaaatagaggaagcagaagaagaaggcgtagaatttaatttcctt
gtagcacctgtagaaatcacaggtgatggcacaagagctactactataaggtgtcaaaaa
atgaagcttggagaagcagatgcatctgggagaagaaaaccagaacctatagatggtgaa
gaaattacctttgaagcagatcttatcgtatcagcaattgggcagagagtaaatgcagat
tgtgtcaaagaacttacaacaacaagaaaaggcactattgcagttaatgaaaataccttt
gaaacaaacattgagggcgtatttgcaggaggcgaagcttcaactggacctaagatagct
atagaggcaatagctcaagggaaaaatgctgcaaaagttatccatagctatttaaatggt
attataattccagttgctaatccaaactatatagttcaaaatgatttatgtaaaaaggac
tttgaacatgtagaaaaacaaaatagagagcctcaagtagtagtccctgcagaaaaaaga
aaactcagctttagcccaatctctgaaacctttactagggaagcagctttaagagaggct
tcaagatgtcttgagtgtggatgtcatgattattttgaatgtaggcttataaaatatatt
ggaaggtataatatagacactgaaaaaatatgtggagaaaaacataagagacaagaagaa
caaaatcatcctttcataacaagaaatgcggataagtgtatactgtgcggtcagtgtgtt
agagcttgcgaggaatttataggaattacagctataggacttgaaaaaagaggatttgac
tccaaggtaattcctgagtttaacttgcctcttcaagagagctcatgtatatcctgcggt
cagtgtgtagacgtctgcccaactggagcatgcatagaaaaagaagctgttaaaaaacag
gttcctgtagattttgacaacataaattccgtatgtaactactgcggtgtaggatgcaat
ttagtacttcaatccaaaggaaaccttgtgtacaaatctattccaaatagaagcaaggat
gaaggcctactatgtattaaaggtagatttggcataaacttcatcaatgatgaaaataga
attaaaacatctgttgtaagaagaaagggagaaagtattgaggttgatttagaagaagct
ctaactcttatctctaaaaatcttcagctagtaaaaggtcaatatggtgataacagtgtg
gctattcttgcttcgccaagatttactaatgaagaggcatttattattaaaaagattgca
gatagactaaatacaagtcttataggctcaataactgccagcgaggcttcaggaatggaa
agtgttcttgggtataatgcttctacaaatagttatggtgagttatacagcaccgattta
atagtttcaataggaaatgtagatgagaatcaccctgttatggcagtaaaaatgaagtat
gctgctagagaaaaagctaaactagtatctgtaagcagcagcaaaacaagaatggaggat
tatgcaaatatttcatttaacccttataacaatatagaattcctaaagtcctttattaaa
gcattatttgatggtggatatgtaaatgaaggtgaagtttcaaacaaagctgaaaatctg
gatagcctaaagaactatgtaaaagatgctaaggattgtactgatgcctctaatcttgct
aagatgtatggagaagctaaaaaatcaataatcgtcattgacgacgatatagcaactgaa
gatacttgcaaattactttcagacgctgcaatagtaacaggcaaaataggaaaaccacat
agtggaattataattgtacgctccagcagtaatgctcaaggctttatagacattggtata
aaagcgaagggtatggagatacttgaacaaataaaagaaggaaaagttaaagcagctgtt
atcattggagaagaccctgtaggtgatgataaagatacagctgaaattttaaataatctt
gagttcttagctactcttgatacctttatgactgacacagcattaatttcaaatgttgtt
gttccaattggaagctttgctgaatctgaaggtacgttgactagatcagatagaaaagta
caaaaaattactccagcagtacgtgttgcaaatgttaatacattatttaataacttgtca
aagattgctcaacacttagatataaacattataaacttacagcaggtagtagaaatgtta
tcctctgagatagaagcatacagcggattatatgaatcagatgcaacaactgatgatatc
tacgtaccaaacagcagaacaaatacctatggttcacaggttctttgtacagatggattt
aataaggaatctagaaaagctgttttatctttaccttatagtgacaaaatgtttaaagat
aaaaaagtttatgattccattcaaatgagatttgattcctacttaaaggaaacgggatta
aatagatag
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