Clostridium sp. OS1-26: RCG18_09950
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Entry
RCG18_09950 CDS
T11102
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
cloo Clostridium sp. OS1-26
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cloo03009
]
RCG18_09950
Ribosome biogenesis [BR:
cloo03009
]
Prokaryotic type
ribosomal protein modification factors
RCG18_09950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
SAM_TNK
Motif
Other DBs
NCBI-ProteinID:
WML36903
LinkDB
All DBs
Position
complement(2010809..2012635)
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AA seq
608 aa
AA seq
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MNSLDTTKCKDELPINTITKIKNILYKIGIYPTEVNWKNSAKNFYSVSVVIKDTNLSTNG
KGTTPLYALASAYGELMERLQNQSFFKLSIDLSPQVLQYRRFYYAPDEKHMSINDVLNSN
DDWIQIQMSRVRPNIDRVELLRKWMAIAYEDTHCDFVALPYLNLTNNNLSYIPIKMISKM
YMSNGMCAGNTIEEALVQGLSEVFERVVNRAIVLNKIIPPTIPHNYITKFPRIEAMIREI
ESSGNYKVIVKDCSLGKNYPVVGVIFINQSDQTYFIKFGSHPIFELALERTLTELLQGQD
IRNMKGVKEFSYKNPIDNEVNNLIGILVNGSGFYPTELFGEKFSYEFKEFKDIKGWSNRS
MLTYLINLLKNEGHDIFVRDASYLGFPSYHIVIPGFSEIEKIDDIDSLEEYADFVRIKKT
IRNLEHVSNVEIEELLQLMKKRNISGAASIPQFLNIQTKNTFPWYYVTIDLFITAAYYKT
GDFANAYKSFDKFLKNIQINPLNKDLYKFYKCVRDYIGTRADNLSEEECINILGAFYPLN
MIKQIMSYFKNEENMFTIFGQLKCWNCNKCDVKASCSYDKVENVYKILKYNYSLTKINQY
HMKNLLDL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattagatacgacaaaatgtaaagacgaattgcctataaatacaataactaaa
attaaaaatatcctttacaagataggaatttaccccacagaagtaaattggaagaattca
gcaaaaaacttttactcagttagtgtagtaattaaagataccaatttatctactaacggt
aaaggcactacacctttatatgcattggcaagtgcttatggagagctgatggaaagatta
caaaatcagtctttttttaagctttctattgatttaagtccacaggtactgcaatataga
agattttactatgcccctgatgaaaagcacatgagcattaatgatgttctaaatagtaac
gatgattggatacaaatacaaatgtctagagtaagacctaacatcgatagggttgaactg
ttaagaaaatggatggctattgcttatgaagatactcactgtgattttgtagctttgcca
tatcttaatctaacaaataataacttgtcttatatacctatcaaaatgatttcaaaaatg
tatatgtctaatggaatgtgcgctggaaatactatagaagaggcattagtgcaaggatta
tcagaagtatttgaaagagttgtaaacagagcgattgtccttaataaaatcatacctcca
actattcctcataattatataacaaaattccctagaatagaagctatgattagagaaata
gaatctagtggaaattacaaggtaatcgttaaagattgttcattaggtaaaaactatcct
gtagttggtgtaatttttattaatcaaagtgatcaaacatatttcattaaatttggatca
catccaatatttgaattggcacttgaaagaacattaactgaacttctacaagggcaagat
attagaaatatgaagggcgtaaaggaattttcttataaaaatccaattgataatgaagtt
aataacttaataggaattcttgtaaatggctcaggcttctaccctactgaactttttgga
gaaaagttcagctatgaatttaaggaatttaaagatattaaaggctggagcaatagatca
atgcttacctatttaataaacttattaaaaaatgaaggacatgatatttttgtaagagat
gcatcttacttagggtttccaagttatcatatagttattccaggcttcagtgaaattgaa
aaaattgatgatatagattccttagaagagtatgctgattttgttagaataaagaagact
ataagaaatttagagcatgtatcaaatgtagaaatagaagaactcctccagcttatgaag
aaacgcaatatcagtggcgcagcttctataccacaatttttaaatatacaaacaaaaaat
acatttccttggtactatgtaactattgatctatttattactgctgcctattataaaaca
ggtgattttgcaaatgcttataaatcttttgataagtttttgaaaaatattcaaattaat
cctcttaataaagatttatataaattctataaatgtgttagagattatattggaactcgt
gcagataacttaagtgaagaagaatgtataaatattttaggtgccttttatccattaaat
atgattaaacagataatgtcttattttaaaaatgaagaaaatatgtttactatatttgga
cagctaaaatgctggaattgtaataaatgtgatgttaaagctagttgctcttatgataaa
gtagaaaatgtatataaaattttaaaatataattattctttaactaaaataaatcaatat
catatgaaaaatttattagatttataa
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