Clostridium sp. OS1-26: RCG18_17465
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Entry
RCG18_17465 CDS
T11102
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cloo Clostridium sp. OS1-26
Pathway
cloo03420
Nucleotide excision repair
cloo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCG18_17465
03430 Mismatch repair
RCG18_17465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cloo03400
]
RCG18_17465
Enzymes [BR:
cloo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCG18_17465
DNA repair and recombination proteins [BR:
cloo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCG18_17465
MMR (mismatch excision repair)
Other MMR factors
RCG18_17465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
PhoH
SLFN-g3_helicase
DEAD
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WML33131
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All DBs
Position
3583315..3584940
Genome browser
AA seq
541 aa
AA seq
DB search
MKSIVETIQKEQDIIIRDTENELLIVQGVAGSGKTSIALHRIAFLLYEGLNSKISANNAI
IISPNLIFSKYISNVLPELGEENVEQITFDDIIIKSLGKRFLVESRQNQLENLILLQQQE
GCFIKTQSIKFKGSEVFVKIIDRLIEYFEKNLIDFKDIYYDGEIIETRQQIKNFFLNNRI
NMVITKRLKRIENMILNKIHPLRKKRLNKIEKVVEKCNNHVLEIKSFARLMAIKEANVFM
ENLHSFTEVDYMKLYKLLFHKKGLLLKLSEGLQLPENISEIIEQTQKNFQQEYIEYEDCL
PLLYIKLKLEGSDEFPEIKQVVIDEAQDYYPIQYQIFKLLFKNSRYTVLGDFNQSLEKEE
DKNIYDIIEEILDKKKSVKVFMNKGYRSSFEINSFTQKLLNDKHQLVSFERHEDEPMVIY
KENKDKLDEAIALDINKYYSKGYESIAIICKTEKEASEIQQRLKSFIDVKVLSDKNSELK
ECPLVMPAYLAKGLEFDVVIVYNVSAENYKSEFDKRLLYVACTRSLHQLSIYYTDERSKF
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtatagtagaaaccattcaaaaagaacaggatattattatcagagatactgaa
aatgagctgctaatagtacagggagtagcaggaagcggtaaaacatctatagcattgcat
agaattgcatttttactttatgaaggattaaactctaaaataagtgccaataatgctatt
attatttcaccaaatcttatttttagtaaatatatatctaatgttcttccggaacttgga
gaagaaaatgtggagcaaataacttttgatgatattattataaagtctttgggaaaaaga
tttttagtagagagcagacaaaatcagctagaaaacttaattttattacagcaacaagaa
ggttgttttataaaaactcagagtattaagtttaagggatcagaagtttttgtgaagatt
atagatagattaattgagtattttgagaaaaacttgattgactttaaagatatatactat
gatggagaaataattgaaacaaggcagcagataaagaattttttcttaaataatagaata
aatatggtaataactaaaaggttaaagagaattgaaaatatgatattaaataagattcat
ccattacgaaagaaaaggttgaataaaatagaaaaagttgttgaaaagtgtaataatcat
gtactcgaaataaagtcttttgctcggctaatggctattaaagaagctaacgtgtttatg
gaaaacttacacagttttacggaagtagattatatgaaattatataaattattgtttcat
aaaaagggacttttattaaagctttctgaaggacttcaacttccagaaaatataagtgaa
ataatagaacagacccaaaagaactttcagcaagaatacattgaatacgaagattgctta
ccacttttgtatattaagctaaagctggaaggtagtgatgagtttccagaaatcaaacag
gtagtcatagatgaggctcaggattattatcctatacagtatcaaatatttaagctttta
tttaaaaattcaagatatacggtattaggtgattttaatcaaagccttgaaaaggaagaa
gataagaatatatatgacattattgaagaaatacttgataagaaaaaatcagtaaaagtt
tttatgaataagggttacagatcttcttttgaaataaattcctttactcaaaagctttta
aatgataagcatcagcttgtatcttttgaaaggcatgaagatgaacctatggtcatatat
aaagagaataaagataaactggatgaagcaatagctttggacattaataaatattacagc
aaaggatatgagtccattgctattatatgtaaaactgaaaaggaagcaagtgaaatacaa
caaagattaaaaagttttattgatgtaaaagtattaagtgataaaaatagtgaacttaaa
gaatgtccattagttatgccagcttatctcgcaaaaggattagaatttgatgtggtaatc
gtatataatgtttcagctgaaaactataaaagtgagtttgataaaaggcttttatatgtg
gcttgcacaagatcccttcaccaattatcaatatattacaccgatgagagaagcaagttt
atctaa
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