Clostridium sp. OS1-26: RCG18_20845
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Entry
RCG18_20845 CDS
T11102
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cloo Clostridium sp. OS1-26
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cloo03000
]
RCG18_20845
Transcription factors [BR:
cloo03000
]
Prokaryotic type
Helix-turn-helix
Other families
RCG18_20845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
PAS_8
GAF
nSTAND3
AAA_2
PAS
Mg_chelatase
HTH_17
AAA
AAA_5
PAS_10
MCM
PAS_4
HTH_30
PAS_9
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WML33761
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Position
4209085..4210962
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AA seq
625 aa
AA seq
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MIKESDIKNSHERCRNIGIDTEQVFSKKILDEIELNIKYVINRELIVNVLPYVEDLVKYS
ECNEFFYVLTDCDGCILSVIGDDKIVADISDMKIIPGAYMNEENVGTNSISMAIKNRCPA
MISSSEHFIKAYSKWTSFAAPIKDNNGLIIGILSIVGSSMQFHPHTIGMIMSSCRSIEKM
IEIQRLNKIQYVIDKRTKTVFDAIPKALIISDIEGKVRTYNKKALEIFRATGEELKSLKV
KEVVKDWDNIIKEIYLSKSVSMEVSILNNSKYRLMAKPIYNTEDNIIEIVYIFEELSKSR
NFSDKFKNYQAFYTFDKIISEDESITSTIEYAKKISNNKGTVLITGENGTGKNLFAECIH
NYSSRMDGPFVKVNCSSILKPLIESELFGYEYEDTVSGKKEVNPGKLELADGGTIFIEEV
GDLSINAQTKILKMIQEGIITRVGSNIPIPVDVRIIAASSKNLKEEVEKGNLRKDLFYRL
NVLPIYLLPLRSRKKDISVLIEHFMKIESQKCNKNNIIIPQEYMMKMLSYNWPDNVEELK
NIVKLIVDTEMMPIDYFNEKNCEIVKLLDLNKEHLKFDYIEKQHILKVLKIFKGNITHAA
EILGMQRNTLYNKIKKHEISISNLD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaagaatcagatattaaaaattctcatgaaagatgcagaaatattggcattgat
actgaacaagtttttagtaaaaagatactagatgaaatagagcttaatattaaatatgta
attaatagagaattaattgtaaatgttttgccttatgtagaggatttggttaaatactca
gagtgtaatgaatttttttatgtacttacagactgtgatggatgcatactaagcgttatt
ggtgatgataagatagttgctgatatttctgatatgaaaataatacctggtgcatatatg
aatgaagaaaatgtcggaacaaactctataagtatggcaataaaaaatagatgtcctgca
atgatttcatcatcagaacactttattaaagcttatagtaaatggacatcatttgctgct
cctataaaagataacaatggtttaataataggaattctaagcattgtggggagttcaatg
cagtttcatcctcataccataggtatgattatgtcttcatgcagatctattgagaaaatg
attgagattcaaagattaaacaagattcaatacgtaatagataaacgcacaaaaacagtt
tttgatgcaatcccaaaagctttaattatatctgatatagagggaaaagtaagaacttat
aataaaaaagctttagaaatattcagagctacaggggaggaattaaaatcattaaaggtt
aaggaggttgtgaaggactgggataacataataaaagaaatatacttaagtaaaagtgtt
tcaatggaagtaagtatattaaataattctaaatataggttaatggcaaagccaatatat
aatacagaagacaacataattgagatagtatacatttttgaagagttgagcaaaagcaga
aattttagtgacaaattcaaaaactatcaagctttttatacctttgataaaataattagc
gaagacgagagtattactagtacaattgaatatgctaaaaagatatctaataataaagga
acagtacttattacaggagaaaatggaacaggtaaaaatttatttgcggaatgtattcac
aactacagtagtagaatggatggtccttttgtaaaagtaaattgtagctcaattctcaaa
ccacttattgaatcagagctctttggatatgaatatgaagatacagtaagtggcaaaaag
gaagttaatccaggaaagcttgaactagctgatggtggtactatatttattgaagaggta
ggagatttatcaataaatgctcaaacaaaaatacttaaaatgattcaggaaggtattata
actagagttggcagcaatatacctataccagtagacgtaagaattatagcagcaagcagt
aaaaatttaaaggaagaagttgaaaaaggaaatttaagaaaagatctattttatcgttta
aatgttctgcctatttatcttctaccacttaggagcaggaaaaaggatatatctgttctt
attgaacattttatgaagatagaatctcaaaaatgcaataagaataatattattatacct
caagaatatatgatgaaaatgcttagttataattggccagataacgttgaagaattaaaa
aatatagttaaacttattgtagatacggaaatgatgccaatagactattttaacgaaaaa
aattgtgaaatagtaaaactattagatttaaataaagagcatttaaagtttgactatata
gaaaaacagcatattttaaaggttttaaaaatatttaaaggtaatattacccacgctgca
gaaatacttggaatgcagcggaacactctatataataaaataaaaaagcatgagattagc
atatccaatttagactaa
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