Clostridium sp. OS1-26: RCG18_25145
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Entry
RCG18_25145 CDS
T11102
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cloo Clostridium sp. OS1-26
Pathway
cloo03420
Nucleotide excision repair
cloo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCG18_25145
03430 Mismatch repair
RCG18_25145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cloo03400
]
RCG18_25145
Enzymes [BR:
cloo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCG18_25145
DNA repair and recombination proteins [BR:
cloo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCG18_25145
MMR (mismatch excision repair)
Other MMR factors
RCG18_25145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
CarD_TRCF_RID
PcrA_UvrD_tudor
AAA_17
DUF2937
Motif
Other DBs
NCBI-ProteinID:
WML34526
LinkDB
All DBs
Position
complement(5072840..5075056)
Genome browser
AA seq
738 aa
AA seq
DB search
MLEETLKKEFCYLRDKIIEKRYQHLDEMQRKAVFNNSNNCVIIACPGSGKTTVIINRLDY
LCTFGPVYNTDYVPNSLKTEDLEHMREYLNNDTAGKTTVIINRAAHLIRDRKVNPDNMIV
ITFTRAAALNMKNRYLKLTNNSKAPFFGTFHALFYKILSRHIGNINIIKSSDAFRLVNGI
LISYLDSVGDEKVKEVLNDISLFKNSGECMEYYKPKIDKSIFIECFNAYENFKAENKFMD
FDDLQINAKKLFLNKPELFSSYKRLFKYILIDEFQDSDALQIELLQMLGRGNSIFAVGDE
DQCIYGFRGSRPDCMVDFDKYFDDGKKIFLRMNYRSKENIVHLSKTLIENNKTRNFKEIE
ANKKEKGKINFFNFEDEKSQSIKIGEIIEELVEKNDEEYRNNAVLFRTNLESRSLIDTFL
KKNIPFKLLDKEYDFFDNFICKDILAYLKLSIDITDKESFIRIINKPFRYISKVNIEKVR
RNIIKESCFETLKNIEDIPIFQIKAMDKLENNVLRLKRMFLRDAINFIVNDLGYLDYIYE
YSQKMKNDFEELKDIIEGFKEAAEDFNSITSFLVHVDEIKEQVNKKSQNEDAVILSTIHG
VKGMEFDNVFIVNCNEGVNPHINSIPGNIEEERRLFYVAATRAIKNLNMFSTRVLKGKSK
EISRFINESGIGYKEDLKEEKSFSGDYKTGEYVVHKAFGKGKIVSIDGNCINITFKNGIE
RKFDIVVLENSDLLVKAN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgctagaagaaacattaaaaaaagagttttgttacttaagagataagattattgaaaaa
cgatatcaacatcttgatgaaatgcaaagaaaagcagtttttaataattctaataattgt
gtaattattgcatgtcctgggtcaggaaaaacgactgttataataaatagactagactac
ttatgtacatttggtcctgtatataatactgattatgttcctaattcattgaagacagag
gacttagaacatatgagggaatatttaaataatgatacagcaggaaaaacgacggtaatt
ataaatagagctgctcatcttataagagatagaaaagtaaatccagataatatgatagta
ataacatttacaagggcagcagccttaaatatgaagaatagatatctaaaattaactaat
aatagcaaagctccttttttcggaacttttcatgcgcttttttataaaatattgagcaga
catataggtaatataaatataataaaaagcagtgatgcctttagactagtcaatggaatc
ttaatatcttatttagattctgtaggtgacgaaaaagttaaagaggttttaaatgacata
tctctttttaagaatagtggagaatgtatggaatattataagcctaagatagataaaagt
atttttatagagtgctttaatgcttatgagaattttaaagctgaaaataagtttatggat
tttgatgatcttcaaatcaatgctaaaaagttattcttaaataaaccggagcttttttct
tcttacaaaagactatttaaatatatacttatagacgaatttcaagattccgatgcactt
caaatagaattgctgcaaatgcttggcaggggtaattctatttttgcagtaggtgatgag
gatcaatgtatatatggttttagaggctcaaggccagattgtatggtggattttgataag
tattttgatgatggaaagaagatatttttaagaatgaactatagaagtaaagagaatatt
gttcatttatccaagacgcttatagagaataataaaactagaaattttaaagagatagaa
gcaaacaaaaaagaaaaaggaaaaataaacttttttaattttgaagatgaaaaaagtcaa
tcaataaaaattggagaaattattgaagaattagtagagaaaaatgatgaggaatacagg
aacaatgcagttttgttcagaactaatttagaaagcagaagtttaatagatactttttta
aaaaagaacattccatttaaacttcttgataaagaatacgatttttttgataatttcata
tgtaaagatatattagcgtacttaaaattgagtattgatattactgataaagaaagcttt
ataagaataataaataagccttttagatacattagcaaagtgaatattgaaaaggtaagg
agaaacataataaaggaaagctgctttgaaacattgaaaaatatagaggatattcctata
tttcaaattaaggccatggataaattagagaataatgtacttagattgaaaagaatgttc
ttaagagacgccataaattttatagttaatgatttagggtatttggattacatatatgaa
tatagtcaaaaaatgaaaaatgattttgaagaactaaaagatataatagaaggctttaaa
gaagctgctgaagactttaacagtataacctcatttttagttcatgtagatgaaataaag
gaacaggtaaataaaaaatctcaaaatgaagatgctgttattttaagtacaattcacggc
gtaaaaggtatggagtttgacaatgtatttattgttaactgtaatgaaggggtaaatcct
catataaacagcatacctgggaacatagaagaagaaagaaggcttttttatgttgctgca
actagagctataaaaaacttaaatatgttttcaactagagtattaaagggtaaaagcaag
gaaatatcaaggtttataaatgagagtggaataggatataaggaagatttaaaagaggaa
aaaagctttagtggagactacaaaactggagagtatgttgtacataaagcctttggaaaa
gggaaaatagtatcaattgatggtaactgtataaacataactttcaaaaatggcatagaa
agaaaatttgatattgttgtgttagaaaacagtgatttattagtaaaggcaaattag
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