Clostridium sp. OS1-26: RCG18_25840
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Entry
RCG18_25840 CDS
T11102
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cloo Clostridium sp. OS1-26
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cloo03016
]
RCG18_25840 (truA)
Enzymes [BR:
cloo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RCG18_25840 (truA)
Transfer RNA biogenesis [BR:
cloo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RCG18_25840 (truA)
Prokaryotic type
RCG18_25840 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
EF-hand_11
Motif
Other DBs
NCBI-ProteinID:
WML34645
LinkDB
All DBs
Position
complement(5222236..5222973)
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AA seq
245 aa
AA seq
DB search
MRNLKMSIEYDGTRYKGWQKQKGDIPTIQAKIENVLSKMTGEDIQVVGCGRTDSGVHAEN
YIANFHTNCTLTVDDMLNYLYEFLPEDIVVKSMKDTTERFHARYNVKSKTYVYRINNNRF
RNVFNRKYAYHTDEELNLNEMKNAAEGLIGTHDFKSFTSLKSSTKSTVRTINYIHITKDD
GMIEIEVNGNSFLLNMVRIITGTLLEVGKGNLNRDDVERILNEMKRSEAGPIAQAKGLCL
KSIQY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacttaaaaatgtcaattgagtatgacggaactagatataaaggatggcaaaaa
caaaaaggagatattccaactatacaagctaaaatagaaaatgtattatctaaaatgaca
ggagaagatattcaagtagtaggttgcggaagaactgattcaggagtacatgctgaaaat
tatatagcaaatttccatactaattgtactttaactgtagatgatatgttaaattatttg
tatgaatttttgcctgaagatatagtagtaaagtccatgaaagatacaacagaaagattt
catgcaagatataatgtgaaatcaaaaacttatgtatatagaataaataataatagattt
agaaacgtatttaatagaaaatatgcttatcatactgatgaagaattaaatctaaatgaa
atgaaaaatgcagcagagggtttaatagggactcatgactttaagagttttaccagctta
aaatctagcactaaatccactgttagaactattaattatatacatataacaaaagatgat
ggaatgatagaaattgaggtaaatggaaatagctttttgttaaatatggtaagaattatt
acaggaactcttttagaagtaggtaaaggcaatcttaatagagatgatgtagaaagaata
ttaaatgaaatgaagaggtcagaagcagggccaatagctcaggcaaagggcttatgttta
aaaagcattcaatactaa
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