Clostridium sp. AWRP: DMR38_00550
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Entry
DMR38_00550 CDS
T07742
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
clos
Clostridium sp. AWRP
Pathway
clos02010
ABC transporters
clos02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DMR38_00550
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DMR38_00550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clos02000
]
DMR38_00550
Transporters [BR:
clos02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
DMR38_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
NAD_binding_7
DUF6506
PucR
DUF5360
Calci_bind_CcbP
Motif
Other DBs
NCBI-ProteinID:
AZV55211
UniProt:
A0A3T0LRJ5
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All DBs
Position
111177..112268
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AA seq
363 aa
AA seq
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MDIMNTLTVITIAKTSNKNLQYKLDFLIKRRGDLKMIKFKSIRKSMRSILLCGLVLVLSI
GLMACGSTSTSNSGTSSKKKTIAFIPPSLVSPFYTQAVTGAKQEAAKEGFNIKVLAPQTE
DDFNGLLKIVEDVITQQVDAIAICTTDDKTMAAVVKKANDAKIPVIVFNSLSPIKGADVY
SYVGYDQKQAGAQAADYLGTKLKDKQFNVGVLEGLPGVFTDNRKGGFVNEAKKYSNVKIV
ATQPADWQREKGMNVATNLYQANKAINMFYGLSDEMAIGAAQAFKSAGVKDGVTIGIDGN
PATLDSIAQGETTATIYTDPKQIGKESIIDCSKALKGEKMANKLDKTKTFVVDKSNVSTY
KAK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggatataatgaatacactaacagtaattacaattgctaagactagtaataaaaattta
caatataaacttgattttttaattaaaaggagaggggatttaaaaatgattaaatttaaa
tcaattagaaaaagcatgaggtcaattctattatgtggacttgtattagttctaagtata
ggtctcatggcatgtggaagtacgagcacttcaaattctggtacaagcagtaaaaagaaa
acgatagcatttattccaccatcacttgtaagtccattttatactcaggctgttacagga
gcaaagcaagaagcagctaaagaaggatttaacataaaagtattggctcctcaaacagaa
gacgatttcaatggattgttaaaaatagttgaagatgttataactcaacaagttgatgct
attgcaatatgtactacagatgataaaactatggctgctgttgtaaaaaaagcaaatgat
gcaaagataccagttattgtatttaactctttaagtccaataaagggtgcagatgtttat
tcttatgttggatatgaccaaaaacaagcaggagctcaagctgcagattatttaggaact
aaacttaaggataaacaatttaatgtgggtgttctagagggtcttcctggtgtatttaca
gacaatagaaaaggtggctttgtaaatgaagctaaaaaatattcaaatgtaaagattgta
gctacacaaccagctgattggcagagagaaaaaggtatgaatgttgcaactaacctttat
caagctaataaggctataaatatgttttatggattgagtgatgaaatggcaataggtgca
gctcaagctttcaaatcagcaggagttaaggatggagttactattggtatagatggaaat
ccagctactttagactcaattgcacagggagagactactgctacaatttatacagatcca
aaacaaattggtaaagaaagtataatagattgttctaaagctttaaaaggtgaaaaaatg
gcaaataaattagataagacaaagacttttgtagtagacaagagtaacgttagtacttat
aaagcaaaataa
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