Clostridium sp. AWRP: DMR38_01185
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Entry
DMR38_01185 CDS
T07742
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DMR38_01185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clos03400
]
DMR38_01185
Enzymes [BR:
clos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DMR38_01185
DNA repair and recombination proteins [BR:
clos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DMR38_01185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
NAT10_TcmA_helicase
PIF1
AAA_22
SLFN-g3_helicase
PhoH
nSTAND3
DEAD
UvrD-helicase
SRP54
NTPase_1
AAA_29
cobW
AAA
ABC_tran
AAA_12
AAA_28
ABC_ATPase
HHH_2
T2SSE
UvrD_C
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AZV55324
LinkDB
All DBs
Position
239940..242177
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AA seq
745 aa
AA seq
DB search
MQELQGIVESIIFQNKDNGYVVAKIRENKDVVTIVGCIPNIIEGQNLKAVGEWVLHPQFG
NQFKVQAFEEIIPSTTIGIERYLASGIIAGIGPVTAKKIVEKFGENTLQILDNNIGRLKE
IEGIGTKKIALIEESYSKQNEVRNIMIFLQTYGITPSQCVKIHKKFGADSISIVKENPYT
LTEEISGIGFKTADKIARSLGIENNSPFRIQSGIRYLVNKFCSLGNTYMPIDNLIKEGVD
ILHITQKELEENIYESSVNGKIKLEKWEDKVCVFSMTYYYCELSVTRKILMLAFTKYKDV
DFNIDKEIEDFEQENNMNFAVSQKEAIRGAVENGVEIITGGPGTGKTTIINCIIRLFEKA
KLKVLMGAPTGRAAKRMSESTKRESKTIHRLLEMGVGSDEEALFFSRGEQSPLKCDVVII
DEASMIDIVLMNNLLKAVSMGTRLIIVGDAEQLPSVGPGNVLRDFIDSKCIKVVRLKEIF
RQSKESMIIVNAHKINSGEMPILNKKNKDFYFIKCQDPSDILDTLVGLIDKRLPNFNSNW
NKIEDIQILSPMRKGILGVSNLNKKLQQVLNPKSSNKREKKFRDITFRVGDKVMQIKNNY
TLKWQGISEENKESGMGVFNGDFGYIEDIDEEKNRVVVVFDEEKRVIYDSMYLDELDLSY
AITIHKSQGSEFPVIIIPMFMGPPLLMNRNLLYTAITRAKQMVILVGSLKALNFMINNNK
SFERYSLLKYRIMDIMESETNATVE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaattacagggaattgtagagagtataatatttcaaaataaagataatgggtat
gtagttgctaaaataagagaaaataaagacgtagtaactatagtaggatgtatacctaat
ataattgaaggacaaaatttgaaggctgtaggggaatgggttcttcatcctcagtttgga
aatcaatttaaggtgcaggcttttgaagaaataatacctagtactactattggcatagag
agatatttggcatctgggataatagcaggaataggccctgtaacagcaaagaaaatagta
gagaagtttggtgaaaatactcttcaaatattggacaataacataggaaggctaaaagaa
atagaaggtataggaacaaaaaaaatagctttaatagaggaatcctattctaaacaaaat
gaagtgagaaatataatgatatttttgcaaacttatggaataactcccagccagtgtgtt
aagatacataaaaaatttggggcagattctataagtattgtgaaagaaaatccatatact
cttacagaagaaataagtggtataggttttaaaacggcagataagatagcaagaagcctt
ggaatagaaaataattctccatttagaatacaaagtggaataaggtatttggtgaacaag
ttttgcagcttgggaaatacgtatatgcctatagataaccttataaaggaaggtgttgac
atactccatataactcaaaaagaactggaagaaaacatatatgaaagttctgtaaatgga
aaaataaaattggagaagtgggaagataaagtatgtgtattttctatgacttactattat
tgtgaattgagtgtaactagaaaaatattgatgctggcttttactaaatataaggacgtg
gattttaatatagacaaagagatagaagattttgagcaggaaaataatatgaactttgct
gtttctcaaaaagaggctattagaggggcagttgaaaatggagtggagataataacagga
ggtcctggaacaggtaaaactacaataattaattgcataattagattatttgaaaaagca
aagcttaaagttttaatgggtgctcccacgggaagggcagcaaagagaatgtcagaatct
acaaaacgagaatcaaagacaatacataggcttcttgaaatgggggtgggaagtgatgaa
gaagctttatttttttcaagaggagagcaatcaccactgaaatgcgatgtagttattata
gatgaggcttctatgatagatatagtgctcatgaataacttattgaaggctgtctctatg
ggaactaggttaataatagtaggtgatgcagagcagcttccatctgtaggacctggaaat
gtgctcagagacttcatagacagtaaatgtattaaagtagttagattaaaagagatattt
aggcaatcaaaagaaagcatgattatagttaatgcccataagataaattctggagaaatg
cccattttaaataaaaagaataaggatttctattttataaaatgtcaggatccttcggat
atattagatacattggtaggattaatagataaaaggctgccaaattttaatagtaattgg
aataaaatagaggatattcaaatactatctcctatgagaaagggaattttaggagtatca
aatttaaataaaaaacttcagcaagttctaaatcctaaaagctctaataagagagaaaaa
aagtttagagacattacttttagggtaggagataaagtgatgcagattaaaaataattat
actttaaaatggcaaggtatttcagaagaaaacaaggaaagtggtatgggtgtttttaat
ggtgattttggatatatagaagacatagatgaagaaaaaaatagagtggtagttgtgttt
gacgaagaaaaaagagtcatatatgatagtatgtacttagatgagttggatttatcttat
gcaataaccatacataaaagtcaaggtagtgaattcccggtaattattatacctatgttt
atgggaccgccgctgcttatgaatagaaatttattgtatacggctataactagggcaaaa
cagatggtaatacttgtgggaagtttaaaagccttaaattttatgataaataataataaa
agttttgaaaggtattcgttattgaaatatagaataatggatataatggagagtgaaaca
aatgctactgtggaatga
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