Clostridium sp. AWRP: DMR38_01860
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Entry
DMR38_01860 CDS
T07742
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos00220
Arginine biosynthesis
clos00240
Pyrimidine metabolism
clos00250
Alanine, aspartate and glutamate metabolism
clos01100
Metabolic pathways
clos01110
Biosynthesis of secondary metabolites
clos01240
Biosynthesis of cofactors
Module
clos_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DMR38_01860 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DMR38_01860 (carB)
00220 Arginine biosynthesis
DMR38_01860 (carB)
Enzymes [BR:
clos01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DMR38_01860 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp
GARS_A
ATP-grasp_4
RimK
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AZV55450
UniProt:
A0A3T0LSB9
LinkDB
All DBs
Position
399875..403081
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AA seq
1068 aa
AA seq
DB search
MPLNKNIKKVLVIGSGPIIIGQAAEFDYSGTQACESLREEGLEVVLINSNPATIMTDREV
ADKVYIEPLTVEFIEKVIKKESPDSLLAGMGGQTALNLTVELYEKKILEKYNVNIIGTSI
EAIKKGEDRELFRDTMNKINQPVVESEIITDMESGKKFANRIGYPVIVRPAYTLGGTGGG
IAENEEQLETILESGLELSSIGQVLLERSIKGWKEIEYEVMRDSFGNCITVCNMENVDPV
GIHTGDSIVVAPSQTLSDKEYQMLRTASINIINEVGIEGGCNVQLALNPKSFEYAVIEIN
PRVSRSSALASKATGYPIAKVAAKIALGYGLDEIKNAVTKKTYACFEPSLDYVVVKIPKW
PFDKFHNADRELGTKMMATGEIMAIGSNFEAAFLKGVRSLEIGAYSLDYKKFKDFTMEEL
KERIAYPDDERIFAMAEMIRRKYRIEKLAEITGIDIFFIKKFQWIIDEEEKLKSSDISNI
DKEWLTLLKRKGFSDKGIADMLRVSPEEVYKLRNIWSITPAYKMVDTCGGEFEALSPYYY
STYEQYDEVEVSDKKKVIVIGSGPIRIGQGIEFDYASVHCIKTLRKLNIETIIVNNNPET
VSTDFDISDKLYFEPITEEDVLSIIDKEKPYGVILQFGGETAIKLAEFLKEKNIVTLGTT
ADQIDEAEDREKFDDLLERLNISRPKGKGVWSVEEGLEEARRLEFPVLVRPSYVLGGQGM
EITYDEKELTYYLSMAFKKDRKNPILIDKYLMGREIEVDAICDGEDVLIPGIMEHLERAG
IHSGDSITMYPSQNISNEMKKKILDYTEKLATGIGIKGMINIQFIEYKGNLYVIEVNPRA
SRTVPYISKVSGVPIVDIATRVTLGEKLKDIGYGVGISKEPDIVAVKVPVFSTQKLPNVE
VSLGPEMRSTGEVLGVSNTLTGALYKGFLAAGMFSNMKNGVMLATIGDHDKQEFLPIAKE
IYKMGIKFMATRNTAKLLRDNGIEVKEVRKMNEENPNIIDVIKNEEVDLVINTPTKGNDS
RRDGFHIRRTAVERNIQVITSLDTFRAMTYVKSEDVDSDELDVFSEYK
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaaataaaaatattaaaaaagtattagtaataggatctggtcctataattata
ggtcaggcagcagagtttgattattctgggacccaggcttgtgaatctcttagggaagag
gggttagaagttgtacttataaatagtaatccggcgaccataatgacggatagggaggtt
gctgataaagtttatatagaacctcttacggttgaatttatagaaaaagttataaaaaaa
gaaagtcctgacagtcttttagcaggcatgggtggtcagactgcattaaatttgacagtg
gaattgtatgaaaagaaaatacttgaaaaatataatgtaaatataataggtacctctata
gaagctataaaaaaaggtgaagatagagaactttttagagatactatgaataaaataaat
cagcctgtagtggaaagtgaaataataacggatatggaaagtggcaaaaagtttgcaaac
agaataggttatcctgttatagtaaggcctgcatataccttaggtggaacaggtggtgga
atagctgaaaatgaagaacagctggaaaccatactggaatcaggactagaacttagttcc
ataggacaggtacttcttgaaagaagtataaaagggtggaaggaaatcgaatatgaagtt
atgagagacagctttggaaactgtataactgtatgtaacatggaaaatgtagatcctgtt
ggaatccatacaggagacagtatagtagtagcacctagccagacattatctgataaggaa
tatcaaatgcttagaactgcttctattaatataataaatgaggttggaatagaaggggga
tgcaatgttcagctggcacttaatccaaaatcttttgaatatgcagttatagagataaat
ccaagggtaagtcgttcttcagctttggcatcaaaagctacaggatatcctattgcaaag
gttgcagctaaaatagctcttggatatggtctggatgagataaaaaatgcagttactaaa
aagacttatgcttgtttcgagccatctcttgactatgtagtagtaaaaattcctaaatgg
ccttttgacaaattccataatgcagatagggaacttggaacaaaaatgatggctacaggt
gaaataatggcaataggcagcaattttgaagctgcatttttaaaaggtgtgagatctctt
gaaataggagcttattccttggattataaaaaattcaaagacttcactatggaagaactt
aaagaaagaatagcatatcctgatgacgaaagaatatttgcaatggcagaaatgattagg
agaaaatatagaattgaaaagttagctgagattacaggaatagatatattctttataaag
aaatttcagtggataatagatgaagaagaaaaattaaagtccagtgacatttccaatata
gataaagaatggctaactttgcttaaaaggaaggggttttcagataagggcatagcagat
atgctccgggtatctccagaagaagtatataaacttagaaatatatggagtataactcct
gcttataaaatggtagatacctgcggtggagaatttgaagccctatcaccttattattat
tctacttatgagcaatatgatgaagttgaggtttcagataaaaagaaggttattgtaata
ggctcaggacctataagaataggtcagggaatagaatttgactatgcttctgttcactgt
ataaagactcttagaaagttaaatatagaaactattatagtaaacaacaatcctgaaact
gtaagtacagactttgatatttcagataaattgtattttgaacctataactgaagaagat
gtactaagtataatagataaggaaaaaccttatggtgtaatacttcaatttggtggagaa
actgccataaagttagcagaatttttaaaagaaaagaatatagttactttgggtacaaca
gcagatcagatagatgaggcagaagacagagaaaaatttgatgaccttttggaaagatta
aatataagtaggcctaagggaaaaggtgtttggtctgtagaagaaggattggaagaagca
agaagattggaattccctgtacttgttaggccgtcctatgtacttggtggtcaaggaatg
gaaataacctacgatgagaaagaacttacttactacttatccatggcttttaagaaagat
aggaaaaaccctatattaatagataagtatttgatgggaagagaaatagaagtagatgca
atttgtgatggagaagatgtgcttatacctggaattatggagcatcttgaaagggctggt
atacactctggtgatagtataacaatgtatccaagtcagaatataagtaatgaaatgaag
aaaaaaatattggattataccgaaaaacttgcaactggaatcggaataaaaggtatgatt
aacattcagtttatagagtataagggaaacctgtatgtaatagaagtaaatccaagggct
tcaaggacagttccatatataagcaaggtgagcggtgtacctatagttgatattgcaact
agggtaactctgggtgaaaagctaaaggatattgggtatggagttggaatttcaaaagaa
ccagatatagtggcagttaaggtacctgtattttctacacagaagcttccaaatgtcgaa
gtatcacttggaccggaaatgagatcaactggggaagtgctcggtgtttcaaacactctt
acgggagcactttataaaggatttttagctgcaggaatgttttctaatatgaaaaatgga
gtaatgcttgctactataggagatcatgacaaacaagaatttttacctatagctaaagag
atttacaagatgggaataaaatttatggctactcgaaatacggcaaaacttttaagagat
aatggaattgaagttaaagaagttagaaaaatgaacgaagaaaatcctaatataatagat
gtcataaaaaatgaagaagtggatttagtcattaatacaccgactaaagggaatgattct
agaagagatggatttcatataagaagaacagccgtagagagaaacattcaagtaataact
tctttagatacatttagagctatgacctatgtcaaatcagaagatgtagatagtgatgaa
ttagatgtattttcagagtataagtaa
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