Clostridium sp. AWRP: DMR38_05020
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Entry
DMR38_05020 CDS
T07742
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos00300
Lysine biosynthesis
clos00470
D-Amino acid metabolism
clos01100
Metabolic pathways
clos01110
Biosynthesis of secondary metabolites
clos01120
Microbial metabolism in diverse environments
clos01230
Biosynthesis of amino acids
Module
clos_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
clos_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DMR38_05020
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DMR38_05020
Enzymes [BR:
clos01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DMR38_05020
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AZV56014
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Position
1121024..1121845
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AA seq
273 aa
AA seq
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MKFTKMQGTGNDFVIIDDRDNRFLEKEKELGLKLCNRHFGVGGDGILIVRQSKIAQIKMI
IINSDGSYAAMCGNGIRCFAKYVWEENLVKESPIKIETGDGIKEAFLNVENGKVKEVTID
MGTPSFDPKKIPVSSCDEVVKKKLKINEKTYSITSMLMGVPHTVIFGDLEKYDVKEGKAI
EKYSIFPEGTNVNFCEVLNKNEIKIKTWERGAGPTLACGTGTCACAVASNKLGFTEGKVK
AQVPGGNLFIEVKDNKVFMTGPAEVSFKGEYDI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttactaaaatgcagggtactggaaatgattttgtgataatagatgatagagat
aatagatttttagaaaaagaaaaagaacttggattaaagctttgtaatagacattttgga
gtaggcggagatggaatattgatagttcgccagagtaaaattgcacagattaaaatgata
ataataaactcagatggttcttatgcagctatgtgtggaaatggaataagatgttttgca
aaatatgtatgggaagaaaatttagtaaaagagtctcctataaagatagagacgggggac
ggtataaaggaagcatttttgaatgtggaaaatggtaaagtgaaggaagtcactattgat
atgggaacaccttcttttgatccaaaaaaaattccggttagctcctgtgatgaagttgta
aaaaagaaattaaaaattaatgaaaaaacttatagtattacttcaatgcttatgggagta
cctcatacagttatatttggtgatcttgaaaagtatgatgtgaaagaaggaaaagctatt
gaaaaatattctattttccctgaaggaactaatgtaaacttttgtgaagtcttaaataag
aatgaaattaaaataaaaacttgggaaagaggagcaggtcctactttagcctgtggtacg
ggaacttgtgcctgtgctgtagcttcaaataagcttggctttacagaggggaaagttaaa
gctcaagttccaggaggaaatctttttatagaagtgaaagataataaagtttttatgaca
ggtcccgcagaggtttcgtttaaaggggaatatgatatttaa
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