Clostridium sp. AWRP: DMR38_05080
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Entry
DMR38_05080 CDS
T07742
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
clos
Clostridium sp. AWRP
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DMR38_05080 (ltrA)
Enzymes [BR:
clos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
DMR38_05080 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
Microp_apicomplexa_17
Zn_SUZ12
Motif
Other DBs
NCBI-ProteinID:
AZV56025
UniProt:
A0A3T0LTW0
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All DBs
Position
1130511..1132280
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AA seq
589 aa
AA seq
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MNTSIMKSALPNITDWQQISWQEIEGYVEKLQQRIYHAESLGEVRKVRNLQRMLINSEAT
LLLSIRRVTQLNKGKRTAGVDGYKALTSSERLELYHTMKELNIKCHNPKPAYRTYIEKKN
GKLRPLGIPTIKDRIYQNIVRMALEPQWETRFEPTSYGFRPKRNCHDAIERIFNTVKGRK
KQLIFEGDFKGCFDNLNHKFIIEQIKGFPQSELIEKWLKAGFVDNSVFNETEEGTPQGGI
ISPLLANIALHGMEEVLGIKYNTVNRKDEVTYENRTKYAMVRYADDFVIMCENKQDATDL
FEILKPYLESRGLELAQEKTKITHITEGFDFLGFNIKRYKTKNGSKLIIKPSKDSIKSFK
GKVSDTTKMLYGKNIQTLINTLNPIIIGTANYWSSVVSKEVYTAMDNYIWVNVYRFLRRL
HPKKSWKWIKKKYFKPDKTGQSKNKWILTEPITNNQLKKIAWTPIVRHSQIKHDYSPYNK
ELKEYFSKRDKKEFDKNNVAYRQKLAKKQDYKCPLCGMSITDFKEGLETHHKTPKIKGGS
DEYKNLQLVHISCHIEYHKVFPVKEDLPDLAQLRNYLRYIKNKKTAGLI
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcaattatgaagtccgcattacctaacattaccgattggcaacaaataagt
tggcaagagattgaaggatatgtagagaaattacaacaacgaatatatcatgccgaaagt
cttggtgaggtacgcaaggttagaaacttgcaaagaatgctaattaatagcgaagcaaca
ttactgttatccataagacgagtaacgcaacttaataagggaaaaagaacagcaggagta
gatggatataaagcattaacttcgagtgaaagacttgaattataccatacaatgaaagaa
ttaaatattaaatgtcacaatcctaaacctgcatataggacatatatagaaaagaaaaac
ggaaaacttagacctctaggaattcctactattaaggatagaatatatcagaacatagtt
agaatggcacttgaaccacaatgggaaacaaggtttgaacctacatcctacggatttaga
cctaaaaggaattgccatgatgctatagaaagaatattcaacacagttaaaggtaggaaa
aagcagttgatatttgaaggtgacttcaaaggttgctttgataacctaaaccataaattt
attatagagcaaattaaaggatttccgcagagtgaacttatagaaaaatggcttaaagca
ggatttgttgataacagtgtatttaatgagactgaggaaggaactccacaaggaggaata
atctccccactccttgctaatatagcattgcatggaatggaagaagtccttggtattaaa
tacaacactgttaataggaaagatgaagtgacatatgaaaatagaactaaatatgctatg
gtaaggtatgctgatgactttgtaataatgtgtgaaaataagcaagatgcaacagacttg
tttgaaattcttaaaccttatcttgaaagtagaggattagaattagcacaggaaaagaca
aagataacacatatcacagaagggtttgactttcttggttttaatattaaaagatataaa
actaaaaatggtagcaaactaataattaaaccttctaaagatagtataaaaagttttaaa
ggtaaagtttcagatactaccaaaatgctgtatggtaagaatattcaaacccttattaac
acactaaatcctataatcataggaactgcaaattactggtcatcagtagtatctaaagaa
gtttatactgcaatggacaattatatttgggttaatgtatatagatttcttagaaggtta
cacccaaagaaaagttggaaatggattaaaaagaagtactttaaaccagataaaacaggg
cagagtaaaaataagtggatactaactgaaccgataacaaataatcagttaaagaaaata
gcatggacgccaatagtcagacattctcaaattaaacatgactatagtccatacaataaa
gaactcaaagaatatttcagtaaaagagataagaaagagtttgataaaaataatgttgct
tacagacaaaaattggcaaagaaacaggattataagtgtcccctatgtggaatgagcata
actgattttaaagaaggtttagaaacacatcataaaacacccaaaatcaaaggtggaagt
gatgaatacaagaatcttcaattagtacacatatcatgccacatagaatatcataaggta
tttcctgttaaagaagatttacccgatttagcccaattaagaaattacctaagatatatt
aaaaacaagaaaacagcagggctaatataa
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