Clostridium sp. AWRP: DMR38_06675
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Entry
DMR38_06675 CDS
T07742
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clos
Clostridium sp. AWRP
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clos03016
]
DMR38_06675 (truB)
Enzymes [BR:
clos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DMR38_06675 (truB)
Transfer RNA biogenesis [BR:
clos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DMR38_06675 (truB)
Prokaryotic type
DMR38_06675 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AZV56313
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All DBs
Position
1428629..1429510
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AA seq
293 aa
AA seq
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MIDGILNINKPVGMTSFDVVRKIRSISGNKKVGHTGTLDPIASGVLPICIGGATKFADYI
MKSQKVYLAELKLGVNTDTYDREGTIIDTSEVKLDEKSVRDTILSFQGELEQLPPMYSAI
KINGKKLYDLARQGIEIERNKRKISIYSIEIINMELPYVVFQVKCSKGTYIRSLCHDIGE
KLNCGGIMWNLKRMATGNFNISNSILLEDLQKDSISKYIIPVDKALEEYPKVIVEDEYLK
HVLNGITIKDEEFLDKIQEGKIYRVYIHESKFIGIGSRKTFGFRMVKLFVRGN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgattgatggaattttaaatataaataaacctgttggaatgacttcttttgatgtagtt
aggaaaattagatcaatatcaggtaataaaaaagttggccatacaggtactcttgaccct
attgcatcaggagtacttcctatttgtataggtggtgctacaaaatttgcagattatata
atgaaaagccaaaaagtttatctagctgagttgaagcttggagttaatacggatacctat
gatagggaaggaactataatagatacttcagaggttaagcttgatgaaaaaagtgtaaga
gatacaattttaagttttcagggggaactggaacaacttccacctatgtattcagcaatc
aagattaatggaaaaaagctttatgatttagcaagacaaggaatagaaatagagcgaaat
aaaagaaaaatcagcatatattctatagaaattattaatatggaattaccttatgtagtg
tttcaagttaagtgttccaaaggaacttatataagaagtttgtgccatgatattggtgaa
aaattgaattgcggtggcataatgtggaacctaaaaagaatggctacgggaaattttaat
atttcaaattctattttactagaagacctgcagaaagacagcatatcaaaatacattatt
ccagtagataaagcgttagaagaatatcctaaggttatagttgaagatgaatatttaaaa
cacgttttaaatggtatcactataaaagatgaagaatttttagataaaattcaagaagga
aaaatctatagggtatatatacatgaaagtaaatttataggtattggaagtaggaaaact
tttggatttagaatggtaaaattattcgttagaggtaattaa
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