Clostridium sp. AWRP: DMR38_07455
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Entry
DMR38_07455 CDS
T07742
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
clos
Clostridium sp. AWRP
Pathway
clos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DMR38_07455 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clos03400
]
DMR38_07455 (uvrA)
DNA repair and recombination proteins [BR:
clos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DMR38_07455 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DMR38_07455 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
AAA_16
AAA_29
nSTAND1
AAA_14
Viral_helicase1
DnaJ_CXXCXGXG
AAA_33
nSTAND3
NACHT
AAA_23
AAA_25
DUF7351
Motif
Other DBs
NCBI-ProteinID:
AZV56454
UniProt:
A0A3Q9S5Z4
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All DBs
Position
1598936..1601503
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AA seq
855 aa
AA seq
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MSTKLRELIINEDINEESEDNMIVIKGAKHHNLKNVSLKLPKNKLIVFTGVSGSGKSTLV
FDIIHAEAQRRFIKGLSTFAKKSVGKIEKPKVEYISGLTPSLAIEQKSVSSNPRSTVGTL
TEISDYLRLLYSRIGIRTCENCKTEIKTLLYKNKKSECPNCHTFIKPLMSSHFSSNTPQG
MCPHCKGLGVTQEVDLKLLIGDESLSILDGAINWFGNLRENNKTTWPTGPLDIVFDHYNL
DIETPWRDLPKSFQDVILYGSGEEKLEYPSIMGGKTTLKPVKGIVTELTRLYYETDSEVT
RKKYAQFMSFNTCSVCKGTKLSKEANSVRIGKRTISEVSNMSVREALSFIKDIYEHVPNS
IFKMSEEIILEIYKRLSFLNDVGLHYLSLNRSAPTLSGGEGQRVRLAAQLSSEITGITYV
LDEPSTGLHPRDLENLVSTLLKLRDKGNTVIVVEHDEEIMKHADYIVDIGPYAGVLGGKI
IAQGSLDAVKNNSNSLTGKYLSKTLKVNDAMYNNLENNRFLTIKGTDLNNLRSVTANFRL
NTLNVVTGVSGSGKSSLVSRTLKPLLENLLNKADNKVEHYSEILGYEDLDKVINVSQEPI
GRTPRSNPATYIGVFDKIRKVFANTKYAKEHHMGFDYFSFNSVKGRCPYCEGQGQIKIEM
HFLPDVWIECDECGGRRFKEEVLKNKINGKNIADVLDMDANEASEFFKDYKDIHLVLEVL
KEVGLGYIKLGQSATTLSGGEAQRVKLAKELSRKAKGKTVYIFDEPTNGLHFHDVSQLLA
IFDKLLRAGHTLIVIEHNLDVIKSAGWIVDMGPEGGKDGGKVIVEGTLEDVINSKESFTG
RAIKQSESMKNLIRC
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagtactaagcttagagaacttataataaatgaagatattaatgaagaatctgaagat
aatatgattgttataaaaggtgcaaagcatcataatcttaaaaacgtttctttgaaactg
ccaaagaataaactcattgtatttactggagtcagtggaagcggaaaatctactttagta
tttgatataatacatgctgaagcacaacgaagatttattaaaggtttatccacctttgca
aaaaaaagtgtgggaaaaattgaaaagccaaaggttgaatatatttcaggcttaacccca
tcccttgccatagagcaaaaaagtgtaagcagcaatccacgatctaccgttggaaccttg
acggaaatttctgattatctgcgtcttttatattccagaataggtattagaacctgtgaa
aactgtaaaacagaaataaaaacactactttataaaaataaaaaaagtgaatgtcctaac
tgtcatacctttattaaacctcttatgtcatcacatttcagttccaatactcctcaggga
atgtgtcctcattgtaagggacttggtgtcacgcaggaagttgatttaaagcttttaatt
ggtgatgaaagcttaagcattttagatggtgctattaattggtttggaaatcttagagaa
aataataaaactacatggccaacagggcctttagatattgtatttgatcattataattta
gatattgaaacaccctggagggatttacctaagagttttcaagatgtaatattgtatgga
tcaggagaagaaaagttagagtatccatctataatgggaggcaaaactacacttaaacct
gttaaaggaattgttacggagttaactagactttattatgaaacagattccgaggtaaca
agaaaaaagtatgcacaatttatgagcttcaatacttgcagtgtctgcaagggtacaaaa
ctatcaaaagaagcaaatagcgtcagaataggaaaaagaacaatatcagaggtttcaaat
atgtctgtgagagaagctttaagctttattaaagatatatatgaacatgttccgaattct
atattcaagatgtcagaggaaataattttggagatatataaaagattatcttttttaaat
gatgttggcctccattatttatctttaaacaggagtgcacctaccttatctggaggtgaa
ggccagagagtgaggctggctgcccagcttagcagtgagattacaggcataacttatgtt
ttagatgagccatcaacaggactgcatccccgggatttagaaaatctagtaagcacgctc
ttaaagttaagggataagggaaatacagtaattgttgtagaacatgatgaagaaataatg
aagcatgcagattatattgtagatataggcccttatgcaggggtcttaggtggaaaaata
atagcacagggaagcttagatgctgttaaaaataatagtaattcactaacgggaaaatat
ttgagtaagactttaaaagtcaatgatgctatgtataacaatttagaaaataatagattc
cttacgataaaaggtacagacttaaataatttaagaagtgttacagcaaacttcaggtta
aatacattaaatgttgtaactggagtcagcggcagtgggaaaagcagcctagtaagcaga
actttaaaacctctcttagaaaatttattaaataaagcggataataaagtagaacattac
agtgaaattttaggatatgaagacttagataaggtcataaatgtttcacaggagcctata
ggaagaactccaagatctaatccggctacttatataggagtgtttgataaaatacgaaaa
gtctttgcaaatacaaaatatgctaaagaacaccatatgggctttgattatttcagcttt
aactcagtaaaaggaagatgtccctattgtgaaggtcagggtcagataaaaatagaaatg
cactttttaccagatgtatggatagaatgtgatgaatgtggaggcagaagatttaaggaa
gaagtgcttaaaaataagatcaatggaaagaacattgctgatgtgctggatatggatgcc
aatgaggcatcagaattctttaaagattacaaagatatacatttagtccttgaagtttta
aaagaagtaggacttggatatatcaagcttggtcaaagtgccacaaccttaagtggagga
gaggcacaaagggtaaaacttgcaaaggaactcagcagaaaagctaaaggaaaaactgta
tatatcttcgacgagcctacaaatggactgcattttcatgatgtatcccagctgcttgct
atttttgataaacttcttagagcgggacatactcttatagttatagaacataatttggat
gttataaaatcagcaggatggatagtagatatggggccagaaggtggaaaagatgggggt
aaggttattgtagaaggtactttggaggatgttattaactcaaaggagagctttactgga
agagctattaagcaatcggaaagtatgaaaaatttaataagatgctaa
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