Clostridium sp. AWRP: DMR38_08625
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Entry
DMR38_08625 CDS
T07742
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
clos
Clostridium sp. AWRP
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clos03009
]
DMR38_08625
Enzymes [BR:
clos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DMR38_08625
Ribosome biogenesis [BR:
clos03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DMR38_08625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AZV56658
LinkDB
All DBs
Position
1849738..1850697
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AA seq
319 aa
AA seq
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MKVEIGKNEAGQRLDKFSRKWLQDVPLSGIYRAIRKGDIKVNGKKAKEKYFLLEGDIVNA
EYIISKETKSKFERIDNAFLKIIYEDKNMLLVEKWPGVLVHSDKNSKDATLTDYVLSHLY
DRGEFNPEEEVTFTPSPCNRLDRNTCGIVIYGKNYEALKLLNEMIRERSIKKYYIALVIG
KIKDGVYEGYIKKDRTNNKSSVSNTPEKNSKKISMRVKNVNTCGIYSLIQLELITGRSHQ
LRAHLAYLGNAIIGDSKYGVSNINSFFYNKYGLDYQYLYAYKLNFRSCPEKLNYMENKTI
TEGLPPVLKKIKKDIFNKF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggagataggaaagaacgaagctggtcaaagattagataaattttcaagaaaa
tggcttcaggatgtgccgcttagtggtatatacagagctataagaaaaggtgatattaaa
gtaaatgggaaaaaagctaaagaaaagtatttccttctggaaggagatatagtaaatgca
gaatacataatttctaaggaaacaaaatctaaatttgaaagaatagacaatgctttcttg
aagataatttatgaagacaaaaatatgcttttggtagaaaaatggcctggagttttggta
cattcagataaaaattccaaggatgccactttaactgattatgtactttcacatttgtat
gataggggagaatttaatccagaagaagaggttacttttactccatcaccttgtaataga
ttagacaggaatacttgtggtatagttatttatggaaaaaattatgaagcattaaagtta
ttaaatgagatgataagggaaagaagtataaagaaatattatatagctcttgtaattgga
aaaataaaagatggagtttatgaaggttacataaaaaaagatagaacaaataacaaatcc
agtgtaagcaatacaccggaaaaaaattcaaaaaagatatctatgagagtaaaaaatgtt
aacacctgcggcatatattcattgatacaacttgagctaattacaggtagaagccatcag
ttgagggctcacttagcatatttaggaaatgctataataggagatagtaaatatggtgtt
tcaaatataaatagttttttctacaataaatatggtttggattatcaatacttatatgca
tataaattaaactttaggagctgtcctgagaaacttaattatatggaaaacaagaccata
acagagggacttccacctgtattaaagaagataaaaaaggatatatttaataaattctaa
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