Clostridium sp. AWRP: DMR38_10325
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Entry
DMR38_10325 CDS
T07742
Name
(GenBank) PAS domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
clos
Clostridium sp. AWRP
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clos03000
]
DMR38_10325
Transcription factors [BR:
clos03000
]
Prokaryotic type
Helix-turn-helix
Other families
DMR38_10325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
PAS_8
Mg_chelatase
PAS
AAA
PAS_9
AAA_7
MCM
HTH_30
AAA_19
HTH_50
AAA_16
DUF4374
nSTAND3
T2SSE
HTH_28
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZV56961
UniProt:
A0A3Q9S8T4
LinkDB
All DBs
Position
2218202..2219572
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AA seq
456 aa
AA seq
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MINLNSSKQSFEGFLESIPEGVMVCNIYGEIKFVNTTLLEITGYSLQFIMNMNMEDMLDN
WSNIIDNIHNTNIQEDIETTVKSINNILKLNLSIYVLYTEKIDDKIIIVVFKEIKKERKL
EEKRLKGRAIYTFDKIIGKNKNFLKIIKYSKKIANSKSTVLITGESGTGKEIFAQAIHNY
SDRKENVFMAVNCGAIPEKLIESELFGYEEGAFTGAKKGGNPGKFEMASGGTIFLDEIGE
MPVEMQVKLLRVIEEEVVVRIGGYKQIPINVRIIAATNKNLKEEVENGNFRRDLFYRLNV
LPIHLPSLRNRKDDIYLLVDYYMNRISRKLNKRKVEITDDQMNKLVQYNWPGNIRELENV
IEFFINIEHIDESVVKTDSLYKEHKRKGSYIYYDEDFMFNMNLESLEKSHIENVIKKFKG
NVTLAAKAMGIGRNTLYRKIKKYNIYCSTLEHDSKT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgataaatctcaatagtagtaaacaaagctttgaaggatttcttgaatccatacctgaa
ggcgttatggtttgtaacatttatggagaaattaaatttgtgaatactactttactagaa
attactggatatagcctccaatttataatgaatatgaatatggaagatatgttagataat
tggagtaatataatagataatatacataatacaaatattcaagaggatatagaaactacc
gtaaaatctattaacaatatacttaagttaaatttaagtatatatgtattatacacagaa
aaaatagatgacaagataatcatagttgtttttaaagaaataaaaaaggaaagaaaatta
gaagaaaagcggctaaaaggtagagcaatatatacttttgacaaaataatagggaaaaat
aaaaactttttaaagataataaagtattctaaaaagatagctaatagtaagtctactgta
ttaataacaggagaaagtggtacaggaaaagaaatttttgctcaggctatacacaattac
agtgatagaaaagaaaatgtttttatggctgttaattgtggtgcaattccggaaaaactt
atagagtctgaactttttggatatgaggagggtgcttttacaggagctaaaaagggagga
aacccaggtaaatttgaaatggcaagcggtggaactatttttttagatgaaataggtgaa
atgcctgttgaaatgcaagtaaagctattaagagttatagaagaagaagtagttgtaaga
attggaggatacaagcaaatacccataaatgttagaataattgcagctacaaataaaaat
ctgaaggaggaagttgaaaatggaaattttagaagagatttgttttatagattaaatgtt
cttcctattcatcttccttctttaaggaatagaaaagacgatatttatctattggttgat
tattatatgaatagaataagtagaaaattaaataaaagaaaagtagaaattactgatgac
caaatgaataaattagtacaatataattggcctggaaacataagagaattagaaaatgtt
attgagttttttataaatattgagcatatagatgagagtgttgttaagacagatagttta
tataaagaacataaaaggaaaggcagttatatatactatgatgaagattttatgtttaat
atgaaccttgagagtttagaaaaatcacatatagaaaatgtaataaaaaagtttaaggga
aatgtcactttagctgccaaggctatggggataggtagaaacactctttatagaaaaatt
aagaaatataatatttactgttccacactggaacatgattccaaaacgtaa
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