Clostridium sp. AWRP: DMR38_11300
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Entry
DMR38_11300 CDS
T07742
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos03420
Nucleotide excision repair
clos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DMR38_11300
03430 Mismatch repair
DMR38_11300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clos03400
]
DMR38_11300
Enzymes [BR:
clos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DMR38_11300
DNA repair and recombination proteins [BR:
clos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DMR38_11300
MMR (mismatch excision repair)
Other MMR factors
DMR38_11300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
PhoH
DEAD
AAA_30
SLFN-g3_helicase
ResIII
CbiA
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AZV57139
UniProt:
A0A3Q9S7M9
LinkDB
All DBs
Position
complement(2445483..2447780)
Genome browser
AA seq
765 aa
AA seq
DB search
MAINVMDMENEKEHLEETLNWIDAQIKNVNSEDEKLKIIIDGLRKQSRGKYNEELETKEK
LYNITHKNLEKYMESKNKPYFGRVDFREYKGEEETFYIGKFGLGDMEKGDEKVIDWRAPL
ADLYYSGVSGETFYRSPQGIINGELNLKRKFLIEDGKLKDAFDEGINEIILQSADENENV
LVDEFLKINLEQSANSKLKDVVATIQKEQNNIIRTEKNISLVVQGSAGSGKTTVALHRLA
YLLYRYKGKIQGEDIVVVAPNKLFLNYISDVLPNLGIEKVKQVTFEKMCCQILNLKSKVY
TKDKKLSSIIENKKYSDVENTLESSRVRGSILYKNLIDRYIEYVEERDVNIDDIKIDNYI
LFNKEEICRLYSSDMKHLPINNRKHEIKRYFLLKIDDKINKIMDKIDFYYEYMIARLKKS
MEDGPDRRKTLTSVYNERDKKKKDTKNRAIQAFECYFNRWSEINTENLYEEFLNDKEVFD
RIIKGNISENIWNNIKEEVKENREKKVIDSDDLAPLCYLKFKIEGVSKKFKYKHIVVDEA
QDYSAFQMIILKEISINDSMTIVGDLGQGIYYYKGIASWKDLIEDVFDSNAKYTQLEHSY
RSTMEIIKFANKVLKLQENNLKPAVPVLRHGKVPQVIEFKNNREFGDVLDMIVEEVYSAG
KKSIAVIGKTYDQCKKIREYLKKYSSYSWSLVRENDNNLSFENIIIPSYMTKGLEFDCSV
IYNCSEDNYGENELDRKILYVVLTRALHMEYIFYSGEKSKLIENI
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggctataaatgttatggatatggaaaatgaaaaagaacatttagaagaaaccttgaat
tggatagatgctcagattaaaaacgtaaattcggaagatgaaaagctaaaaataattata
gatggacttagaaaacaatctagaggtaaatataatgaagaattagaaacaaaagaaaag
ctatataatataactcataagaatcttgaaaaatatatggaaagtaagaataagccttat
tttggaagagttgattttagagaatacaagggagaagaagagactttctatataggtaaa
tttggacttggagatatggaaaagggagatgaaaaggtaattgactggagagctcctcta
gcagatctttattatagtggagtttcaggagaaactttttatagatctcctcaaggtata
ataaatggagaacttaatttaaagagaaaattcttgattgaagatggaaaattgaaagat
gcttttgatgaaggaataaatgaaataatactccagtccgcagatgaaaatgaaaatgtc
ctggtagatgaatttttaaaaataaatttggaacaaagtgcaaatagcaaacttaaggat
gtagttgctaccatacaaaaggaacaaaataatataataagaactgaaaaaaatatttca
cttgtagttcaaggatctgcaggttctggaaaaactacagtagcacttcatagacttgcc
tacctactttatagatataaaggtaaaattcagggggaagatattgtagttgtagcccct
aataaattgtttttgaactatatttcagatgtgctcccaaatttaggcatagaaaaagtc
aaacaggtaacttttgaaaaaatgtgttgccagattttgaatttaaaaagcaaagtatat
accaaagataaaaaactgtccagcataatagaaaataaaaaatacagtgatgtagaaaac
acacttgaatccagtcgcgttaggggaagcattttatataaaaatttaattgatagatat
atagaatatgtagaagaaagagatgtaaatattgatgatataaagatagataattatatc
ctgtttaataaagaagaaatatgcagattgtattcaagtgatatgaaacatctgcctata
aataatagaaagcatgagataaagagatattttttgctaaaaatagatgataaaataaat
aaaataatggacaaaatagacttttattatgaatatatgattgcaaggctgaagaaaagc
atggaggatggtccagatagaagaaagacactcacaagcgtatacaatgaaagagataaa
aagaagaaagacactaaaaatagggcaatacaggcgtttgaatgctatttcaatagatgg
agtgagattaatacagaaaatctttatgaagagtttttaaatgacaaagaagtatttgac
agaattataaagggaaatatttcagagaacatatggaataatataaaagaggaggtaaag
gaaaatagagaaaaaaaagtaatagatagtgatgatttggctcctctttgttatttgaaa
tttaaaatagaaggagtttctaaaaagttcaaatacaagcacattgtagtggatgaggcg
caggattatagtgcttttcagatgatcattttaaaagaaattagcataaatgattccatg
actatagttggagatttgggacagggtatatactattataaaggaatagctagttggaaa
gatttaatagaagatgtatttgattctaatgcaaaatatactcaacttgaacacagttat
cgttctacaatggaaataataaaatttgcaaataaggttcttaagcttcaggaaaacaat
ctaaaacctgcagtaccagtacttagacatggtaaagtaccacaagtaatagaatttaaa
aacaatagagaatttggtgatgttttagatatgattgtagaggaagtttacagtgcaggt
aagaaaagcatagctgtcataggcaaaacctatgatcagtgtaagaaaatcagagagtat
ttaaaaaagtacagttcttatagttggagtctggtaagggaaaatgacaataatttaagt
tttgaaaacataataattccatcttatatgacaaagggattggagtttgactgtagtgta
atttacaattgcagtgaagacaattatggtgaaaatgaacttgatagaaagatattatat
gtagttcttacaagggcacttcatatggaatatatattttattcaggtgaaaagtctaaa
cttattgaaaatatttag
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