Clostridium sp. AWRP: DMR38_13030
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Entry
DMR38_13030 CDS
T07742
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos00220
Arginine biosynthesis
clos00240
Pyrimidine metabolism
clos00250
Alanine, aspartate and glutamate metabolism
clos01100
Metabolic pathways
clos01110
Biosynthesis of secondary metabolites
clos01240
Biosynthesis of cofactors
Module
clos_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DMR38_13030 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DMR38_13030 (carB)
00220 Arginine biosynthesis
DMR38_13030 (carB)
Enzymes [BR:
clos01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DMR38_13030 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
Dala_Dala_lig_C
GARS_A
ATPgrasp_Ter
ATP-grasp_3
MGS
ATP-grasp
ATP-grasp_4
PA
Motif
Other DBs
NCBI-ProteinID:
AZV57462
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Position
complement(2860154..2863360)
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AA seq
1068 aa
AA seq
DB search
MPLRENLKKVLIIGSGPIIIGQAAEFDYSGTQACEAIKKEGIQTVLVNSNPATIMTDKNI
ADKTYIEPLTVESLEAIIGREKPDGVLAGFGGQTALNLAMELNEIGVFKKYNVELLGIKT
ESIKNAEDRESFKNLMNEIDEPIAISEIATNLEECKKFLDKVSLPIIIRPAYTLGGTGGG
IASTYEEYMEICENGLEESPINQILLEQSLAGWKELEYEIMRDKKDNCMVVCNMENLDPV
GIHTGDSIVVAPSQTLNDREYQMLRRSAIKIIRTLKIEGGCNIQFALDPNSNRYMVIEVN
PRVSRSSALASKAAGYPIAKIAAKIALGYTLDELKNYVTGNSSALFEPALDYCVVKMPKW
PFDKFKTANRTLKTQMKATGEVMAIDRSFESALLKAVISLEGKIIGLKLDKFENMSKDEI
IAKINNQDDERLFALAEALRKGMTIDELHELTKIDEWFLGGIENIVNMENELTSNVPNVE
TIQKAEIMGFTDEYICKLIGMKLEDLKKLREVNGIKSVYKMVDTCSGEFEAKTSYYYSCY
DLESDNVVSDNKKILVIGSGPIRIGQGIEFDYCCVNGVWAIKKAGYEAVIINNNPETVST
DFDISDKLYFEPLYIDDVMNVINEEKVDGVIVQFGGQTALNLSKKLNDRGVNLLGTSFES
IDLAEDREKFRVLLKELDINSPVGGSVTSLEEADNLVAEIGYPVIVRPSYVIGGRAMKVV
YNYEELCKYLKDAVNLSKEHPVLVDKYIVGKEIEVDAISDGKDLIIPGIMEHIEKTGVHS
GDSIAVYPASDLPENVLKKIEDYTVKIAKKLNVKGLLNVQYAFDGDKVYVIEVNPRASRT
VPILSKVTNIPMVEIAVGVMLGKKIKDFHYKQDMYKYSNIYAVKMPIFSNKKLSGVEVAL
GPEMKSTGEVLGVDFDKDKAIYKAFKASGVKILQEGNLYVSVNDIDKKDSLNVIKKYGEL
GFSISASRGTYKFLSENGVKCSEFDLDTAVEYIKDKKIDIVINTATQGYNTTRQGFILRR
TALAHDKIVFTCLDTANAYINAILTEKNEENIEYRTMGEYLQKPALRS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgccgttaagagaaaacttgaaaaaggttttgataataggatcgggtcctataataata
ggtcaggctgcggaatttgattactcgggaacacaggcctgcgaggctataaaaaaagag
ggaatacaaactgttctggtaaatagtaatcctgctactataatgactgataaaaatatt
gcagacaagacctatatagaacctttaactgttgaatcactagaggcaataataggaaga
gaaaaaccagatggggttttagctggatttggtggacagactgccttgaatttggccatg
gagcttaatgaaattggggtatttaaaaaatacaatgtagaacttcttggaataaaaact
gaatccataaagaatgcggaagatagggaaagctttaaaaatctaatgaacgagatagat
gaacctatagctataagtgaaattgctacaaatctagaagaatgcaaaaagtttttagat
aaagtcagccttccaattataataagacctgcatataccttaggaggaaccggaggcggt
attgcaagtacttatgaggaatatatggaaatatgtgaaaatggattggaagagagtcct
ataaatcaaatacttcttgagcaaagtttagctgggtggaaagaattagaatatgaaata
atgagagataaaaaggacaactgcatggtagtttgtaatatggaaaatttggaccctgtg
ggaatacacacaggagacagcatagtggtagctccatctcagacacttaatgatagagag
taccagatgcttagaagatctgctataaagataataaggaccttaaaaatagaaggtgga
tgtaatattcaatttgcattagatcctaatagtaataggtacatggttatagaagtaaac
cctagagtaagcagatctagtgcactggcctcaaaagcagcaggatatcctatagctaaa
attgcagctaaaattgcccttggatatactttagatgaacttaaaaattatgttacagga
aattccagtgcactgtttgaaccggctctagattattgtgtagttaaaatgcctaagtgg
ccttttgataaatttaaaactgcaaacaggactttaaaaactcagatgaaagctacagga
gaagttatggctatagataggagttttgaaagtgctcttttaaaagcagttataagttta
gaaggaaaaataataggactgaaattagataaatttgaaaatatgagcaaagatgaaata
atagcaaagataaataaccaggatgatgaaagactttttgctttagcagaagctcttaga
aaaggaatgactatagatgagcttcatgaattaaccaaaatagatgaatggttcttaggt
ggaatagaaaatatagtgaatatggaaaatgaattgacaagcaatgtgccaaatgttgaa
actattcaaaaagctgaaatcatgggatttacagatgaatatatttgcaaattaataggt
atgaaattagaagatttaaagaaacttagagaagtaaatggcataaaatctgtttataaa
atggtagatacctgcagcggggagtttgaagcaaaaacctcttactattattcttgttat
gatttagaaagtgacaatgttgtttcagataataagaaaatacttgtaataggttcagga
cctattagaataggacagggaatagagttcgattactgctgtgttaatggtgtgtgggct
ataaaaaaagcaggttatgaagctgttataataaataataatccagagacagtaagtact
gattttgatatttcagataagttgtattttgagcccctttatatagatgacgttatgaat
gtaataaatgaggaaaaagtggatggagttatagtacaatttggaggacagactgcactt
aatctatctaaaaagttaaatgacagaggagtaaatttacttggcacatcctttgaatct
atagatttggcagaagacagggaaaaatttagagtacttcttaaagaacttgacataaat
tcacctgtaggtggatctgtaacaagccttgaagaagcagataacttagtagctgaaata
ggttatcctgttattgttagaccatcttatgtaataggtggtagggctatgaaggttgtc
tacaattatgaagagctctgtaaatatttaaaagatgccgtaaatttatctaaggaacat
cctgttcttgtagataaatatatagtgggaaaagaaatagaagtagatgccatatcagat
ggtaaagatttaataattcctggaataatggagcatatagagaaaacaggggtacattct
ggggacagtatagcggtatatccagcatcagatttaccagagaatgtgcttaaaaaaata
gaagattatacagtaaagattgccaagaagttgaatgttaaaggacttttaaatgttcaa
tatgcttttgacggagataaggtgtatgtaatagaagtaaatccaagagcatcgagaact
gtacctattttgagtaaagttactaatattccaatggtagaaatagctgtaggagttatg
ttaggtaaaaaaataaaagattttcactataaacaggatatgtataagtacagcaatatt
tacgcagttaaaatgcctatattctccaataaaaagttatctggagtggaagtagctctt
ggacctgagatgaaatctacaggagaagtcttaggagtggattttgataaagacaaggct
atatataaagcatttaaagcttcaggagttaagatactgcaagaaggaaatctttatgtt
tctgtaaatgatatagataaaaaggattcactaaatgtaatcaaaaaatatggagaactt
ggatttagtataagtgcatccagaggaacttataagttcttaagtgaaaatggagtaaaa
tgcagtgagtttgatttagatactgcagtggaatatataaaagataagaaaatagatata
gttataaatacagccactcaaggatataacactacaaggcaaggttttatactcaggcgt
acagctttagctcatgataaaatagtatttacatgcttggatacagcaaatgcctacatt
aatgctattttgacagagaaaaatgaagaaaatatagaatacagaactatgggtgaatat
ttgcagaaaccagcacttagaagttaa
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