Clostridium sp. AWRP: DMR38_14210
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Entry
DMR38_14210 CDS
T07742
Name
(GenBank) PAS domain-containing protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
clos
Clostridium sp. AWRP
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clos03000
]
DMR38_14210
Transcription factors [BR:
clos03000
]
Prokaryotic type
Helix-turn-helix
Other families
DMR38_14210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_5
Mg_chelatase
PAS
AAA_2
AAA
HTH_11
PAS_9
HTH_8
HTH_7
HTH_23
HTH_Tnp_1_2
MCM
HTH_24
PAS_8
HTH_10
PAS_4
AAA_16
HTH_28
Sigma70_r4_2
AAA_3
Sigma70_r4
HTH_26
HTH_3
DoxA
U79_P34
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AZV57671
UniProt:
A0A3Q9S8J9
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Position
complement(3088173..3090101)
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AA seq
642 aa
AA seq
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MDRKIGVIASDMELKNSFMQLFAKEVNKGNMIIDILKPDNMEKQGIILESKGVKAIIARS
GGYRHTIGKVSVPVINLKVTTLDILYAIKTASKYKKDVILIISDLEYFDYDEWKDVISEN
VIIERFCDAENIEDRVKKYAERRESVVIVGGGIPCACARRLGMNNVHIGASDESIYEVVA
RAEELIDNLNEQKLKNEVLKKILDGVHDAVVAIDRRCNVILYNKKAEELLKKQARNVINK
SVVDVCPELSFMVEFLKNNTSESNELKKLKKITVMANTSILSLDENTYGVLCSFQDVTKL
QSLEKKVRYELNKKGLIAKYKFEDIIANDPVMKNTLAKSIKIGLSDGTVMIYGESGTGKE
MIAQSIHNISSRKDGPFVAINCAAISENLLESELFGYEEGAFTGARKGGKPGLFELAHKG
TLFLDEVNSISPNLQGKLLRVLEEKEIMRIGSDYVIPLDVRIIAAANEKLKSKVEDGTFR
ADLFYRLNILKMRIPPLRERKKDIIPLFKYYVKILSNESNGIEISKEIEKKLLDYPWKGN
VRELRNIAERYVIFSELDLDENENGIIEDKRDSIREDYDPNGNNLIDLKKIDRFVEEKVI
EMLAGKGMTKTEIAQKLGISRTALWKKLNRNENGGSTNGRKK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaaaataggtgtcattgcttctgatatggaactaaaaaatagttttatgcag
ttatttgcaaaagaagtcaataagggtaacatgattattgatattttaaaaccagataat
atggaaaaacagggcataattctagaaagcaaaggtgtgaaagcaattatagctagaagc
ggtggataccgccataccattggaaaagtaagtgttcctgttataaatctaaaggtaact
actttagatattttgtatgcaataaaaactgcaagtaagtataagaaagatgtaatattg
attatctcagacttagaatactttgattatgatgagtggaaagatgtaattagtgagaat
gtaataattgaaaggttttgcgatgctgaaaacatagaagatagagtaaagaaatatgct
gaaagaagagaaagtgttgtaatagttggaggaggaattccttgtgcttgtgctagaaga
cttggtatgaataacgtccacataggtgctagtgatgaatcaatttatgaagtggtagca
cgtgctgaggaattaatagacaatctgaatgaacaaaaattaaaaaatgaagtcttaaaa
aaaattttagatggggtgcacgatgctgttgttgcaatagatcgacgttgtaatgttata
ttgtataataaaaaagcagaggagttgctaaaaaagcaagcaagaaatgtgataaataaa
agtgtagtagatgtttgtccagaacttagctttatggtggaatttttaaaaaataatact
agtgagagtaacgaactaaaaaaactaaaaaaaataacggttatggcaaatacttcaata
ttaagcttagatgaaaatacctatggtgttctgtgttcttttcaagatgtaactaaactt
caaagtttagagaaaaaggtaaggtatgaattaaataaaaaaggacttatagccaagtat
aagtttgaagatattattgcaaatgaccctgtaatgaaaaatacattagcaaagtcaatt
aaaataggactaagtgatggtactgtgatgatttatggagaaagtggtactggtaaggaa
atgattgcacaaagtatacataacataagtagtagaaaagatgggccttttgtggcaatt
aattgtgcagctatttcagaaaatctcttggaaagtgaactttttggatatgaggaggga
gcatttactggagctagaaaaggtggaaagcctggattatttgaacttgcccataaaggt
actctatttctagatgaggtaaatagtatttctcctaatttacaaggaaagttattacgt
gttttagaggaaaaggaaataatgagaataggatcagattatgtaattccattagatgtt
agaattatagctgctgcaaatgagaaattaaaaagcaaggttgaagatggaacttttaga
gcggacttattttatcgattaaatattttgaaaatgagaattcctccccttagagaaagg
aaaaaagatataatcccattatttaaatattacgtaaaaattttatcaaacgaaagtaat
ggaatagaaataagtaaagaaattgaaaaaaagcttcttgattatccctggaagggtaat
gtaagagaactgagaaatattgctgaaaggtatgtaatttttagcgaattagatttagat
gaaaatgaaaatggaattatagaggataaaagagattctattagagaagattatgatcct
aatggtaataacttaattgacctaaaaaaaattgatcgttttgtagaagaaaaagtaata
gaaatgcttgcaggcaaaggaatgacaaaaacggaaatagcccaaaaacttggtataagc
agaacagctttgtggaaaaaattaaatcgtaatgagaatggagggagtacgaatggtaga
aaaaagtaa
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