KEGG   Clostridium sp. AWRP: DMR38_14210
Entry
DMR38_14210       CDS       T07742                                 
Name
(GenBank) PAS domain-containing protein
  KO
K02688  transcriptional regulator, propionate catabolism operon regulatory protein
Organism
clos  Clostridium sp. AWRP
Brite
KEGG Orthology (KO) [BR:clos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clos03000]
    DMR38_14210
Transcription factors [BR:clos03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    DMR38_14210
SSDB
Motif
Pfam: Sigma54_activat PrpR_N Sigma54_activ_2 AAA_5 Mg_chelatase PAS AAA_2 AAA HTH_11 PAS_9 HTH_8 HTH_7 HTH_23 HTH_Tnp_1_2 MCM HTH_24 PAS_8 HTH_10 PAS_4 AAA_16 HTH_28 Sigma70_r4_2 AAA_3 Sigma70_r4 HTH_26 HTH_3 DoxA U79_P34 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: AZV57671
UniProt: A0A3Q9S8J9
LinkDB
Position
complement(3088173..3090101)
AA seq 642 aa
MDRKIGVIASDMELKNSFMQLFAKEVNKGNMIIDILKPDNMEKQGIILESKGVKAIIARS
GGYRHTIGKVSVPVINLKVTTLDILYAIKTASKYKKDVILIISDLEYFDYDEWKDVISEN
VIIERFCDAENIEDRVKKYAERRESVVIVGGGIPCACARRLGMNNVHIGASDESIYEVVA
RAEELIDNLNEQKLKNEVLKKILDGVHDAVVAIDRRCNVILYNKKAEELLKKQARNVINK
SVVDVCPELSFMVEFLKNNTSESNELKKLKKITVMANTSILSLDENTYGVLCSFQDVTKL
QSLEKKVRYELNKKGLIAKYKFEDIIANDPVMKNTLAKSIKIGLSDGTVMIYGESGTGKE
MIAQSIHNISSRKDGPFVAINCAAISENLLESELFGYEEGAFTGARKGGKPGLFELAHKG
TLFLDEVNSISPNLQGKLLRVLEEKEIMRIGSDYVIPLDVRIIAAANEKLKSKVEDGTFR
ADLFYRLNILKMRIPPLRERKKDIIPLFKYYVKILSNESNGIEISKEIEKKLLDYPWKGN
VRELRNIAERYVIFSELDLDENENGIIEDKRDSIREDYDPNGNNLIDLKKIDRFVEEKVI
EMLAGKGMTKTEIAQKLGISRTALWKKLNRNENGGSTNGRKK
NT seq 1929 nt   +upstreamnt  +downstreamnt
atggatagaaaaataggtgtcattgcttctgatatggaactaaaaaatagttttatgcag
ttatttgcaaaagaagtcaataagggtaacatgattattgatattttaaaaccagataat
atggaaaaacagggcataattctagaaagcaaaggtgtgaaagcaattatagctagaagc
ggtggataccgccataccattggaaaagtaagtgttcctgttataaatctaaaggtaact
actttagatattttgtatgcaataaaaactgcaagtaagtataagaaagatgtaatattg
attatctcagacttagaatactttgattatgatgagtggaaagatgtaattagtgagaat
gtaataattgaaaggttttgcgatgctgaaaacatagaagatagagtaaagaaatatgct
gaaagaagagaaagtgttgtaatagttggaggaggaattccttgtgcttgtgctagaaga
cttggtatgaataacgtccacataggtgctagtgatgaatcaatttatgaagtggtagca
cgtgctgaggaattaatagacaatctgaatgaacaaaaattaaaaaatgaagtcttaaaa
aaaattttagatggggtgcacgatgctgttgttgcaatagatcgacgttgtaatgttata
ttgtataataaaaaagcagaggagttgctaaaaaagcaagcaagaaatgtgataaataaa
agtgtagtagatgtttgtccagaacttagctttatggtggaatttttaaaaaataatact
agtgagagtaacgaactaaaaaaactaaaaaaaataacggttatggcaaatacttcaata
ttaagcttagatgaaaatacctatggtgttctgtgttcttttcaagatgtaactaaactt
caaagtttagagaaaaaggtaaggtatgaattaaataaaaaaggacttatagccaagtat
aagtttgaagatattattgcaaatgaccctgtaatgaaaaatacattagcaaagtcaatt
aaaataggactaagtgatggtactgtgatgatttatggagaaagtggtactggtaaggaa
atgattgcacaaagtatacataacataagtagtagaaaagatgggccttttgtggcaatt
aattgtgcagctatttcagaaaatctcttggaaagtgaactttttggatatgaggaggga
gcatttactggagctagaaaaggtggaaagcctggattatttgaacttgcccataaaggt
actctatttctagatgaggtaaatagtatttctcctaatttacaaggaaagttattacgt
gttttagaggaaaaggaaataatgagaataggatcagattatgtaattccattagatgtt
agaattatagctgctgcaaatgagaaattaaaaagcaaggttgaagatggaacttttaga
gcggacttattttatcgattaaatattttgaaaatgagaattcctccccttagagaaagg
aaaaaagatataatcccattatttaaatattacgtaaaaattttatcaaacgaaagtaat
ggaatagaaataagtaaagaaattgaaaaaaagcttcttgattatccctggaagggtaat
gtaagagaactgagaaatattgctgaaaggtatgtaatttttagcgaattagatttagat
gaaaatgaaaatggaattatagaggataaaagagattctattagagaagattatgatcct
aatggtaataacttaattgacctaaaaaaaattgatcgttttgtagaagaaaaagtaata
gaaatgcttgcaggcaaaggaatgacaaaaacggaaatagcccaaaaacttggtataagc
agaacagctttgtggaaaaaattaaatcgtaatgagaatggagggagtacgaatggtaga
aaaaagtaa

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