Clostridium sp. AWRP: DMR38_16760
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Entry
DMR38_16760 CDS
T07742
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
clos
Clostridium sp. AWRP
Pathway
clos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DMR38_16760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clos03019
]
DMR38_16760
03009 Ribosome biogenesis [BR:
clos03009
]
DMR38_16760
04131 Membrane trafficking [BR:
clos04131
]
DMR38_16760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clos04147
]
DMR38_16760
Messenger RNA biogenesis [BR:
clos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
DMR38_16760
Ribosome biogenesis [BR:
clos03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
DMR38_16760
Membrane trafficking [BR:
clos04131
]
SNARE
SNARE associated proteins
Others
DMR38_16760
Autophagy
Aggrephagy
Other aggrephagy associated proteins
DMR38_16760
Exosome [BR:
clos04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DMR38_16760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_14
AAA_16
AAA_22
RuvB_N
AAA_2
AAA_5
TIP49
nSTAND3
Zeta_toxin
AAA_33
AAA_lid_PRS2_C
DUF815
Sigma54_activat
ABC_tran
AAA_18
AAA_24
IstB_IS21
Mg_chelatase
RNA_helicase
AAA_7
AAA_28
TsaE
CDC48_2
ATPase
AAA_19
SLFN-g3_helicase
AAA_29
NPHP3_N
Parvo_NS1
NB-ARC
AAA_17
SKI
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AZV58116
UniProt:
A0A3Q9S8S5
LinkDB
All DBs
Position
complement(3606740..3608851)
Genome browser
AA seq
703 aa
AA seq
DB search
MVQLNSIKLKVREGLVEDSRKGIIRMNREDMEVLGLDTGQFVNIKGKRNTVAKVYPSFNA
IYGMPLIQMDGIIRRNAGTGIDDIVTISETKVKTARKIMLSPIDTFFKPKEDDKKEIKNM
LKGIPMLSDDELSLMIFGNNEVGFYVSGTAPSGPVKIDEETDLIFIEGELGDVRARVTYE
DIGGLNKEVKKIREIVELPFKYPGVFKKLGFEAPKGILLYGPPGTGKTLIAKAIASETKA
HFIHVNGPEIINKFYGESEAKIREIFKEAKSRAPSIIFLDELDSIAPRREYVHGEVEKRV
VAQLLALMDGLESRGQVVVIGATNIPDSLDPALRRAGRFDKEIAIMPPDKKGRFKILQIH
TKGMPLDEDVELEELADVTYGFVGSDLSALCKEAGMIALRNILSKIGLDERLPPFKVSMN
NFIEALREIQPSSTREYCTEVPDINWEDIGGLEEIKDTLKTLIELPLHDLNLCKEYNFTL
PKGILLTGSSGSGKTLLAKAAGNSTKANFITISGLTLASHGMGEAEKVLHDIFIKAKQSS
PCILFFDEIDAICSYRSNSANNLSDRLISRLILEFDNLEKSNEVIVLAATNRINLIDPVL
LREGRFEYILEIPLPNVDEREAILKIHSQNLPISESVDFMQLAENTKGMTGAELATLCHK
SSFIALRKALKTGLKIKIDDKIFNQAITEVKHKKKFEEVIAPK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtacaacttaatagtattaagctaaaagttagagaaggcttagttgaagattctcga
aaaggcatcattcgtatgaatagagaagatatggaagtattaggattggatacgggacaa
tttgtaaatatcaaaggaaaaagaaatactgtagcaaaagtttatccatcatttaatgcc
atttatggaatgcctcttattcaaatggatggaattattaggagaaatgctggtacaggc
attgatgatattgtaactattagtgaaactaaagtgaaaacagcacgtaaaataatgctt
tctcccatagacacattttttaagccaaaagaagatgataaaaaagaaattaaaaatatg
cttaaaggaattccaatgcttagtgatgatgaattgtctttaatgatctttggaaacaat
gaggttgggttttacgtaagtgggacagcaccatctggtccagtaaaaatagatgaagaa
actgatcttatttttatagaaggggagctcggagatgtaagagcaagagttacatatgag
gatataggaggtttaaacaaagaagttaaaaaaataagagaaattgtagaacttcctttt
aaatatccaggtgtatttaaaaaattgggatttgaagcgccaaaaggcattttgctttac
ggacctccaggtacaggaaaaactttaatagctaaagctatagcatcagaaacaaaagct
cattttattcatgtaaatggtcctgaaataataaataagttttatggtgaaagtgaagca
aaaattagagaaatatttaaggaagctaaaagtagagcaccaagtataattttccttgat
gaacttgattcaattgcaccaagaagagaatatgtacatggtgaagttgaaaagagagtc
gtagcacaacttctggcacttatggatggcttagagagtcgaggacaagttgttgtaatt
ggtgccacaaatatacctgattcactagatcctgcgttaagacgagcaggaagattcgat
aaagaaattgcaataatgcctccagataaaaaaggaagatttaaaatactacaaattcat
acaaaaggtatgcctcttgatgaagatgtagaattggaggagttagctgatgttacctat
ggatttgttggatcagatctttcagccttatgtaaagaagctggtatgatagctttacgt
aatattttatcaaaaattggattagatgaaagacttcccccatttaaagtttctatgaat
aattttattgaagcactgcgagaaattcaaccttcttctacccgtgaatattgtacagaa
gttcctgatataaattgggaagatattgggggattagaagaaattaaagacactttaaaa
actttaatagagcttccactacatgatctcaatttatgtaaagaatataattttaccctc
ccaaaaggtattttattgacaggttcctcaggtagtggaaaaactttacttgcaaaagct
gctggtaattctacaaaggcaaactttattactataagtggacttactctagcatctcat
gggatgggggaagctgaaaaggttttacatgatatatttattaaagcaaaacaaagttct
ccttgtattttgtttttcgatgaaatcgatgctatatgcagctatagatctaattcagca
aataatttatcagataggcttataagtcgtcttatactcgaatttgataacctagaaaaa
tctaatgaagtcatagtattagccgctacaaatagaataaatctaattgatccagtttta
ctacgagaaggacgatttgaatatatactagaaattccgctgccaaatgtagatgagagg
gaggctattttaaaaatccattctcaaaatttacctatttcagaaagtgtagattttatg
caattagctgaaaacaccaagggaatgactggagcagaactggctactttatgtcataaa
tcttcatttatagcacttagaaaagcacttaaaacaggattaaagattaaaatagatgat
aaaatctttaatcaagccattactgaggtgaaacataaaaagaaatttgaggaggtgatt
gcccccaaatag
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