Clostridium sp. AWRP: DMR38_18430
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Entry
DMR38_18430 CDS
T07742
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
clos
Clostridium sp. AWRP
Pathway
clos01501
beta-Lactam resistance
clos02010
ABC transporters
clos02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DMR38_18430
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DMR38_18430
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DMR38_18430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clos02000
]
DMR38_18430
Transporters [BR:
clos02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
DMR38_18430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF1285_N
Whirly
Motif
Other DBs
NCBI-ProteinID:
AZV58391
LinkDB
All DBs
Position
complement(3930676..3932292)
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AA seq
538 aa
AA seq
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MKKFIYIMLGMLIISIVSITLIGGALQKKVEQTESNNYKNNVIYNLGKLPEDLIMLDSNN
LREKDILANTFEGLVNCDENGKIVPALAESWDISQDGTNYTFKIRKDGKWSDGSDITADD
FVNFFSDILNKNTNNIFSDQLNCIFGVEDYRKGKCDFNNVAITALNNKTLNIRLNYPCNY
FLNILSQPIYALRNIDSKLIDWKKDYRSIMYSGSFCINNISDSGEITLKKNSHYWNKSQV
KSNSITLSSLKTRESALAAFQSSTINVFTDPPLGELKTIEGKAKYKVSPLLQGEGIAFNL
KRSGIANDNSFRKAVAASINRDNIVKNILNSTALEADSYIPRYTGDGLNGKYINKVFFQG
NEDIKKASDMMKNVSPSYGETSLKLIYLDTVENKKICETIGKSIKKTVGINVKCEGYESS
KFNEKLKKGDYDMAEIKYEGYYDYPMSFLDMWRSTSQYNLYGYRNVQFDNKFMNGSFEKD
GTKRIEILKEMENMLMEDMPIIPLYFNNVIISEKDYVQGIYTNKLGNIKLDKAYLNVH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttatttatataatgttaggtatgctcataatttccatagtttctataact
ttaattggaggagctttgcaaaagaaagttgagcaaactgaaagcaataattataagaat
aatgtgatatataatttgggtaagttacctgaagatcttataatgcttgattccaataat
ttaagggaaaaggatatacttgcaaacacatttgaagggcttgtgaattgtgatgaaaat
ggaaaaatagttcctgcacttgccgaaagctgggatataagtcaagatggaactaattat
acttttaaaataagaaaagatggaaagtggagtgatggttctgatattactgcagatgac
tttgtgaactttttttctgatattttaaataaaaatacaaataacatattttcagatcag
ctaaattgcatatttggagtagaagattatagaaaaggcaagtgtgattttaacaatgta
gcgataactgctttgaataataaaacactcaatataagattaaattatccctgtaattat
tttttgaatatactctctcagcctatatatgcacttagaaatattgattctaaactcata
gattggaaaaaggactatagatcaataatgtattcaggaagtttttgtataaacaatata
tctgacagcggggagattacattaaagaagaattctcattactggaacaagtcacaggtg
aaaagtaatagtataacattgagttctttaaaaactagggaaagtgcacttgctgcattt
caaagttctacaataaatgtgttcacagatcctcctttaggagaattaaaaactatagaa
ggtaaggcaaaatataaagtttcacctttacttcaaggggaagggatagcttttaattta
aaaaggagtggtattgcaaatgacaatagttttaggaaggcagtagctgcttctattaat
agagataatatagttaaaaacatattaaatagcactgctttggaggcagactcttatata
cctcgatatacaggagatggactgaatggtaaatatataaataaggtattttttcaaggt
aatgaagatataaaaaaggcttctgatatgatgaaaaatgtaagtcctagttacggagaa
acttcattaaaactcatatatttggacacagttgaaaacaaaaagatatgtgaaaccata
ggtaaaagtataaaaaaaactgttggaataaatgtgaagtgtgaaggatatgaatcttct
aaattcaatgagaagttaaaaaaaggtgattatgatatggcagagataaaatacgaggga
tactatgattatcctatgtcatttttggatatgtggaggtctacatcccaatataattta
tatgggtatagaaatgtgcaatttgacaataaatttatgaatgggtcatttgagaaagat
ggaactaaaagaatagaaatacttaaggaaatggaaaatatgttgatggaagacatgcca
attatccctctatatttcaataatgtaattataagtgaaaaagactatgtacagggtatt
tatactaataaattgggaaatataaagttagataaagcttatttaaatgttcattga
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