Clostridium sp. AWRP: DMR38_18480
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Entry
DMR38_18480 CDS
T07742
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos03420
Nucleotide excision repair
clos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DMR38_18480 (pcrA)
03430 Mismatch repair
DMR38_18480 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clos03400
]
DMR38_18480 (pcrA)
Enzymes [BR:
clos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DMR38_18480 (pcrA)
DNA repair and recombination proteins [BR:
clos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DMR38_18480 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DMR38_18480 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZV58401
UniProt:
A0A3T0M0P3
LinkDB
All DBs
Position
complement(3943041..3945281)
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AA seq
746 aa
AA seq
DB search
MDLKSLLNKEQYEAAVYVDGPLLILAGAGSGKTRVLTYRIAHMIKDLNIYPSKILAITFT
NKAAGEMKDRIKELVGDEVDGMWVSTFHSSCVRILRREIDKLGYNKNFAIYDSYDQKVLI
KQCMKELNISDKDITDREIINKISGQKDNLISPQQFKKENEGNFRMNRIADVYLLYQKKL
KDNNALDFDDLIYKTVQLFKENEDVLEFYQRKFKYIMVDEYQDTNRSQYEFVRLLAKEHK
NICVVGDDDQCIYAWRGADIKNILDFEKDYPNAKVIKLEQNYRSKGNILKAANDVISNNS
NRKEKMLRTESENGDKIKLYRAYSDIDEGRYIASKIKEILKKDEGKHYKDFAILYRTNAQ
SRIFEDVFMKSNIPYRIIGGLKFYDRKEIKDIMAYLKFINNPLDDVSLRRIINVPKRSIG
DSTVQKIQDFANSMNESMYNVLLSIDEVLNLTKRNINCINKFVSLINSFIRSRDKITVSS
LIKEILDTTGYLEELKDSKEADSISRVENLQELVSAAAEFETSSEDSSLSAFLEKVTLVS
DVDNFDQDADSVVLMTVHSAKGLEFPVVFMAGMENGIFPGTQSLNEFKEMEESRRLCYVG
ITRAKEKLYMTSAETRRVFGRMVSYQQSSFISEISHDLIEYDSLKKSDFTSSINKQLNKN
TFSWGKKVHQNNLIENPVSPSVESVPKGNYLKLENIKEGTKVKHGKFGLGTIVSISKSGS
DIKLTIVFDKMGIKNLMYGVAPLEAV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaagtcttttgaataaagaacagtatgaagcagccgtatatgtagatggc
cctctattgattttagctggggcaggttctggaaagaccagagttttaacttatagaatt
gcgcatatgattaaggatctaaatatatatccttctaaaatactagctataacttttact
aataaggctgcaggagagatgaaagacaggataaaagagttagtaggagatgaagtagat
ggaatgtgggtatctacatttcattcaagctgtgtaagaatacttagaagagaaatagac
aaattaggatataataagaattttgcaatatatgatagttatgatcaaaaagtgcttata
aaacagtgtatgaaagagttaaatataagtgacaaagatataactgacagagagataata
aataaaattagtggacaaaaagataatttaatatctccacagcaatttaaaaaggagaat
gaaggaaacttcagaatgaatagaattgcagatgtttatttgttatatcaaaaaaagctc
aaggacaacaatgcactggattttgatgatcttatatataaaactgtacagctttttaag
gaaaatgaagatgtactggaattttatcagagaaagtttaagtacataatggtagacgag
tatcaagacaccaatagatctcaatacgagtttgtaaggcttcttgcaaaggaacataaa
aatatatgtgtagtaggagatgatgatcaatgtatttatgcttggagaggtgcggacata
aaaaatattttagattttgaaaaagattatcccaatgcaaaggtaataaagttagagcaa
aattatagatccaagggtaatatattgaaggcagctaatgatgttataagtaataattca
aatagaaaagaaaaaatgctgagaactgaaagtgaaaatggagacaaaataaaattgtat
agggcttattcagatatagatgaaggcagatatattgcatctaagatcaaagaaatattg
aaaaaggatgaaggcaaacattacaaggactttgcaatactttatagaactaatgcccaa
tcccgtatatttgaagatgtatttatgaaatcaaacattccctatagaattattggaggc
ttaaagttctacgacagaaaagaaataaaggatattatggcttatttaaaatttataaat
aatcctttggatgatgttagtttaagaaggataataaatgtgccaaagagaagtataggg
gattctacagtacagaaaatacaggattttgctaattctatgaatgaatccatgtataat
gtacttttatctatagacgaggttttaaatttaacaaagagaaatattaattgtataaat
aaatttgtgagtcttataaatagttttataagaagcagggacaagattactgtgtccagc
cttataaaggagatattagatactactggatatttagaggaactcaaagattcaaaggag
gcagatagtataagcagggtagaaaatctacaagaacttgtatctgctgctgcagagttt
gaaacttcttcagaagattcgtctctttctgcatttttggagaaggtgactttggtttca
gatgtagataattttgatcaagatgctgactcagttgtacttatgacagtacatagtgct
aaagggttggagttccctgtagtatttatggcgggaatggaaaatggaatatttccggga
acccagtctttaaatgagtttaaggaaatggaagagtctagaaggctttgttatgttgga
ataacaagagctaaggaaaaactttatatgacttctgcggaaaccaggagggtatttgga
agaatggtatcttaccagcagtctagttttataagtgagatatctcatgaccttatagag
tatgacagcttaaaaaaatccgattttactagttctataaataagcaattaaataaaaat
actttttcctggggtaaaaaggttcaccaaaataatttgatagaaaatccagtatctcct
tctgtagaaagtgttccaaagggtaattatttaaaattagagaatataaaagaaggaaca
aaagttaaacatgggaagtttggattagggactattgtaagtatatctaaaagtggtagt
gatataaaacttactatagtttttgataagatgggaataaaaaatttaatgtacggagta
gcaccgctggaagctgtataa
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