Clostridium sp. AWRP: DMR38_19120
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Entry
DMR38_19120 CDS
T07742
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos00300
Lysine biosynthesis
clos00470
D-Amino acid metabolism
clos01100
Metabolic pathways
clos01110
Biosynthesis of secondary metabolites
clos01120
Microbial metabolism in diverse environments
clos01230
Biosynthesis of amino acids
Module
clos_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
clos_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DMR38_19120 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DMR38_19120 (lysA)
Enzymes [BR:
clos01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DMR38_19120 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AZV58521
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Position
complement(4088300..4089595)
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AA seq
431 aa
AA seq
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MKMMGSMEIRNNVLYIGGMSTGELVKEFKTPLYVMDEELVRDRCRRYYKSFEAGKANKVT
YAGKAFLTLAMCQIINSEGLYLDVVSDGELYTALKSGFPMEKIYFHGNNKTLDEIEMGVK
LGVGKFVVDNFYEMEKINSTARKYGKIQEILLRVTPGIEAHTHDYIKTGQIDSKFGFTVL
NDEVMNIIKSAVDFPNLKFAGIHCHIGSQIFETKPYEDEVEIMLNLVKRIKDELGCEVEE
LDLGGGFGIYYTEGDKPKSVEDFCSIILQKAKEKAKELDLKLPTLVIEPGRSIIGNAGTT
LYTIGSIKNIPGVRKYVSVDGGMADNIRPALYGAKYECVLANRVNDGAKETVTIAGKSCE
SGDILIKDVELPESKSGDILAVFTTGAYGYSMSSNYNKILKPAAVLVKEGKARLIAKRQT
FDDLIENEIML
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatgatgggtagcatggaaatcagaaacaatgttttatacattggtgggatgagt
acaggggaattagtgaaagaatttaagactcctctctatgtaatggatgaagaattagta
agagataggtgcaggagatattacaaatcttttgaggctggtaaagctaataaggtcact
tatgcaggtaaagcctttttaactctagctatgtgtcaaataataaacagcgaaggcctt
tacttggatgtagtgtcagatggagaattgtatactgctttaaagagtggcttccctatg
gaaaaaatttattttcatggaaacaataaaaccttagatgaaatagaaatgggagtgaag
ttaggtgtaggcaaatttgtagtagataacttttatgaaatggaaaagataaattctaca
gcaaggaaatatggaaaaatacaagaaatactccttagagtgacaccaggaatagaagct
catacccatgactatataaaaactggtcagatagattctaaatttggttttactgtgtta
aatgatgaagttatgaatataataaaaagtgcagttgattttcctaatttaaaatttgca
ggaatccactgtcatataggttctcaaatatttgagacaaaaccttatgaagacgaagtt
gaaattatgttaaatttagttaaaagaataaaagatgaattgggctgtgaagtagaggaa
ttagaccttggtggaggatttggaatatactataccgaaggggataaacctaaatctgta
gaagatttttgcagtattatacttcaaaaggcaaaggaaaaagctaaagagcttgattta
aaacttcctacgcttgttatagaacctggcaggtctataattggtaatgcgggaacaact
ctttatactataggctctataaagaatattccaggagtaagaaaatatgtatctgtagat
ggaggcatggcggacaatataagaccggctttatatggtgcaaaatacgagtgtgttcta
gcaaatagagtaaatgacggcgcaaaagaaacagttactatagctggaaaatcatgtgaa
tcgggagacatattgataaaagatgtggagctcccggaaagcaaaagcggtgacatatta
gctgtgtttaccacaggagcttatggatattctatgtctagtaactataataagatttta
aagcctgcggcagttttagtaaaggaaggaaaggcaaggctaattgctaaaaggcaaacc
tttgatgatctaatagaaaatgaaataatgttataa
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